Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 3e-12
>seq2
Length=4956242
Score = 87.8 bits (96), Expect = 3e-12
Identities = 348/548 (64%), Gaps = 0/548 (0%)
Strand=Plus/Minus
Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982
|| ||||| ||| ||||| || || || || ||||| || ||||| || | | ||
Sbjct 3220019 CAAGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGTCAGA 3219960
Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042
|| ||||||| |||||| || | ||| || || ||||| | || || |||
Sbjct 3219959 CCAGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAAGAAG 3219900
Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102
|| ||||| ||||| ||||| || ||||| | |||| |||||| || | |||
Sbjct 3219899 ATACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGGACTGATCATCAGCA 3219840
Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162
|||| | ||||| ||||||||||| || || || || || | || |
Sbjct 3219839 ATCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATATTGTCAATAGCATGG 3219780
Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
||||| || |||||| |||||||||| ||| |||| || ||||| |
Sbjct 3219779 AACAAAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATAAGTAATGAGTAGGTC 3219720
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
||||| || | || || || || || || ||| ||| | | ||||| ||
Sbjct 3219719 TCTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACACTTTGCCTCGGGAATT 3219660
Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342
|| || || | ||| |||| | ||| || | || || | || || | || |||
Sbjct 3219659 TGAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATACCATCTGAAGCAGCA 3219600
Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402
||||| || | || ||||||| ||| |||||| || | || || | | ||||||
Sbjct 3219599 AAGAATGCAAGGACACGAGAGATAAAAAATCTCTCATCATCATTAAGACGGTGCTCCCAG 3219540
Query 160403 TGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTT 160462
| | | ||| | | ||||||| ||||| || |||| | ||||| |||
Sbjct 3219539 TCACTGATGTCCTTTCCTAAATCAATTTCTTCAGCAGTCCAGAAAGAAGCCTCAGCCTGC 3219480
Query 160463 TTGTACAT 160470
||||||||
Sbjct 3219479 TTGTACAT 3219472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155160242240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |