Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq2 105 8e-18
seq1 96.9 4e-15
>seq2
Length=4956242
Score = 105 bits (116), Expect = 8e-18
Identities = 159/223 (71%), Gaps = 6/223 (3%)
Strand=Plus/Plus
Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGC 102168
||||||||||| | ||||| || || |||||| | ||| ||| | | | ||||
Sbjct 3219797 TTCCATGTATTAAGAAGAAGGCTGACTGGGCTCTCCGATGGATTGCTGATGATCAGTCCA 3219856
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
|| |||||||||| ||| | || ||||| ||||||||||||||||||||||| |
Sbjct 3219857 CTT---TTGCTGAGCGTCTCGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCTCTGGAT 3219913
Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288
| || | ||| | ||| | |||||||| || |||||||| ||||| ||||| |
Sbjct 3219914 CATTTGCCAGTATCTTCTGGTTGAAGAAGCGTGGACTCATGCCTGGTCTGACGTTCTCAA 3219973
Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
|||| | ||||| ||||| || || | ||| || |||||
Sbjct 3219974 ACGAATTGATCTCGCGTGATGAAGGCATGCACACCGATTTTGC 3220016
>seq1
Length=5930846
Score = 96.9 bits (106), Expect = 4e-15
Identities = 584/923 (63%), Gaps = 25/923 (3%)
Strand=Plus/Minus
Query 111545 TTATTTTGGTCTCAAGACCCTCGAGAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGAT 111604
|||||| || | ||||| ||||| | | ||||| | | | || |||| | ||
Sbjct 4967635 TTATTTCGGATTAAAGACGCTCGAAAGATCGTACCTGCTTAAAATGTATGGCAGAGTTAT 4967576
Query 111605 GGAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGA 111664
|||| || || | ||||| ||| | || ||| | ||||| ||||| |||||| ||
Sbjct 4967575 TGAAAGGCCGCAACAGATGTTAATGAGAGTGGCGGTGGGTATTCATGGCAGAGATATAGA 4967516
Query 111665 TTCTGTTTTGGAGACATACGACAAGATGTCCCGTGG-----TATGTTCATCCACGCAACA 111719
| || | |||||||| | ||||| || ||| |||| ||| || ||
Sbjct 4967515 TAGGGTCATCGAGACATATCAATTAATGTC----GGAAAAATAT-TTCACCCATGCGTCA 4967461
Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779
||||| || |||||| |||| || || | || ||| | || || ||| | | ||
Sbjct 4967460 CCAACACTATTCAACTCTGGCACGCCTAATCCTCAATTATCGTCCTGCTTCTTGGTAGCT 4967401
Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839
| || |||||||| || | |||||||||| || || | || || || ||||||
Sbjct 4967400 ATGAAAGAGGATTCCATAGAAGGCATTTACGATACCCTAAAAGACTGCGCTATGATCTCA 4967341
Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTAT 111898
|| || ||||| || || | ||||| ||| || || | | | || || || ||
Sbjct 4967340 AAAACTGCAGGTGGGATTGGTCTCCACATTCATAATATCCG-GTCGACGGGTGCTTACAT 4967282
Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958
| || | ||||| || |||| ||| | || ||||| | || |||||| ||
Sbjct 4967281 TGCTGGGAGTAATGGCAGCTCCAATGGAATTGTGCCGATGCTAAGAGTTTTTAACAATAC 4967222
Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTG 112014
|| | |||||| | || | ||| | ||| || || | || | || | |
Sbjct 4967221 TGCCAGGTATGTAGATCAGGGTGGTAA-CAAAAGACCAGGTGCTTTTGCTATTTACTTGG 4967163
Query 112015 AGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGG 112074
| || |||||| ||||| | ||||| | ||||| || || || || | || |
Sbjct 4967162 AACCTTGGCACAGTGATATATTAGAGTTTTTAGAGTTACGAAAAAATCACGGCAAAGAAG 4967103
Query 112075 AGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134
| | || || | || | ||||| ||||| || ||| | |||||||| | ||
Sbjct 4967102 AATTAAGAGCTCGAGACTTGTTTTATGCTCTTTGGATCCCTGATTTGTTCATGAAAA-AG 4967044
Query 112135 TTGAGGAGAGTGGCAAT--TGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA 112192
| || | | ||| |||| | |||| || || | || || ||| | || ||
Sbjct 4967043 GTAAGCA-ACAACCAAGAATGGTGCTTATTTTCACCTGATGAAGCTCCTGGTTTATCTGA 4966985
Query 112193 TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGAC 112252
| | ||||| || || ||| | | |||| || || || |||||| | | |
Sbjct 4966984 CGTCTACGGTGATGAATTCGAAACTTTGTACAAAAGATATGAAAAAGAAAA-CAGACATG 4966926
Query 112253 TGCG-ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACT 112310
| || | ||| ||| | || | | ||| || ||| | || ||||| |||||||
Sbjct 4966925 TTCGCAAGGTCAGAGCC-CAGAAGCTCTGGTTTGCCATTTTAGAGACTCAAGTCGAGACT 4966867
Query 112311 GGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTG 112370
|| || |||| |||||||||||||| |||||||| ||| |||||||| ||| |
Sbjct 4966866 GGAACTCCATTCATGCTTTACAAAGATTCCTGTAACAGAAAATCAAATCAAAATAATCTT 4966807
Query 112371 GGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAG 112430
||| ||| || |||||| || || || || || | | | | |||| | |||
Sbjct 4966806 GGTACGATTAAATCTTCCAATCTATGCACGGAGATTATCCAGTACTCGTCCAAACAGGAG 4966747
Query 112431 ACGGCTGTGTGTAACCTCGCATC 112453
|| |||||||||||||| |||||
Sbjct 4966746 ACCGCTGTGTGTAACCTGGCATC 4966724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742368962880
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