Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq1 104 3e-17
>seq2
Length=4956242
Score = 150 bits (166), Expect = 2e-31
Identities = 1067/1691 (63%), Gaps = 69/1691 (4%)
Strand=Plus/Minus
Query 105596 TAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTG 105655
|||||||| || ||||| || || | || ||| |||| | ||||||| || | |||
Sbjct 3634391 TAGTACATTCCTGTCTTAAGACCCTTTTGCCAGCCGTAGAAATGCATACTAGTCAATTTG 3634332
Query 105656 GACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCA 105715
||| || ||| || ||| ||| |||| | |||||| || || || ||| | ||
Sbjct 3634331 CCCATAGTAGGAGCTTGAATGTAAATGTTCAAAGATTGACTTTGATCGATAAAGGCAGCA 3634272
Query 105716 CGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGA 105775
|| | || ||||||||||||| |||| | ||||| || || || |
Sbjct 3634271 CGATCAGCAGCCATATCAATGATTGTCTTCTGAGAAAGCTCCCAAACAGTCTTATACAAT 3634212
Query 105776 TTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATG 105835
||||||||| || ||||| | | ||||| ||||| ||||| ||| | ||
Sbjct 3634211 GCCTTGATATCCTCAGGGATGTTAGGAATATTCTGAATAGAACCATTG---TTGGCAATA 3634155
Query 105836 AG---ATCCTTCATATCCTTGGACCAAAGACC--AATCTTCTTGAGATCATTGACGAGAT 105890
| || |||||| | || ||| || || |||| | || || || | | |
Sbjct 3634154 ATTCTATTCTTCATGTTCTCTCCCCACAGTCCCAAATCGACA--AGGTCCTTCAACA-AC 3634098
Query 105891 GCTTG-TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGT 105948
||| || ||||| || || || || || ||| | ||| |||||||| | ||
Sbjct 3634097 CATTGATTAACAATTTGGAATTCACCGGCAAGAACTCTACG-AGAGTAGATGTTGGATGT 3634039
Query 105949 GTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGG 106008
||| ||||| || ||||| || ||||| | ||||||| || ||||| || ||||| ||
Sbjct 3634038 GTAAGGTTCGAAACATTCGTTGTTACCAAGAATTTGTGATGTTGAGGCAGTAGGCATAGG 3633979
Query 106009 TGCCATCAAAAGACTGTTACGAAGACC---CTTTTCCTTGATGCGTTCCTTGAGAACATC 106065
|| | | ||| ||| | ||||| ||| || | | | ||||||| || |
Sbjct 3633978 AGCAACGAGAAGGGAGTTTCTCAGACCATGCTTAGCCATCTTC---TTCTTGAGAGCAGC 3633922
Query 106066 CCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTG--AAGCACCCCTT 106121
|||||| || || | | || | | | |||||| ||||||||| || |||| ||
Sbjct 3633921 CCAGTCCCAGA-GATCAGTGGGAGTGATAT-CCCACAAATCAAATTGCAAAAGACCCTTT 3633864
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGC 106181
| | | |||||||| | | |||||||||| || | ||| || | ||||
Sbjct 3633863 GAGGCA--GGAGAACCTTGGTAAGTCTCATAGGGTCCGTACAATTCGGCGAGTTCAACCG 3633806
Query 106182 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 106241
| || | | || ||||| ||||| ||| || || | |||| | |||||| |
Sbjct 3633805 AAGATTCAACAGCAGCATGATAGATGGTCTCAGCAATTTGAACGTTCAATTGCTTGGCCT 3633746
Query 106242 CATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCA 106301
|| || || |||| | ||| ||||| |||| || | |||||||| ||| |
Sbjct 3633745 CAGGGGAGTCGAATGGCAAACGGAGAGCCATAAAGGCATCGGCCAAACCTTGAATACCAA 3633686
Query 106302 AACCAATAGGTCTGTGTCGCATATTAGA-CTTTCGCGCAGTCTCAACGGGATAAAAATTT 106360
| |||| |||||||| || | ||| ||||| || || || || ||||| |||
Sbjct 3633685 GAGCAATGGGTCTGTGACGGAAATTGCTTCTTTCA-GCTTCCTTGACAGGGTAAAAGTTT 3633627
Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420
|||||||| | || | ||| | || |||| ||| | | || |||||||| | |
Sbjct 3633626 CTGTCAATAATAACATTCAAGTTTCTAGTGACAACCTTGGCAACCTCGTGAAGTTTGTTA 3633567
Query 106421 TAAT-------CAAAAGTGCGAGTCTCTTCATTGACAT---ACTTTGGAAGGGCGATTGA 106470
| | |||| | | ||| ||| | || | || || | | ||
Sbjct 3633566 AAGTTATACCACAAACCTTC----CTCATCACTTTCAACGAAAGCAGGTAGAGACAACGA 3633511
Query 106471 TGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAA 106530
||||||||| || || || || || | | |||||| | |||||| |||||
Sbjct 3633510 TGCCAAATTACAGACGGCAACTTCTTCAGGAGAAGAGTACTCAACAATTTCACAGCACAA 3633451
Query 106531 GTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTT 106590
|||||| ||| || || ||||| || | |||||||||||| | || || ||||||||
Sbjct 3633450 GTTGGAGGACTTGATAGTACCCAAGTTTTGTTGGTTACTCTTGCTATTACAAGCATCCTT 3633391
Query 106591 GTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CAT 106649
|| |||||| | || | || ||||| || || | | |||||| || | ||||| | |
Sbjct 3633390 ATAAAGCATGAATGGGTTACCAGTCTCAGTTTGAGCTTCGAGAATAGCATACCACAGCTT 3633331
Query 106650 CGGCGGCTGGTACAATGG--CGT-TGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGG 106706
| | || | |||| | | || | | || ||| ||||||||| || || |
Sbjct 3633330 TTGGGCCTTG----ATGGTTCTTCTGCCTCTACCTTCCTTCTCGTACTTCTCATAAAGAG 3633275
Query 106707 CTTCAAACTCCTCACC---CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 106763
| | ||||| ||||| || | || || || || || | ||||| | |
Sbjct 3633274 CAACGAACTCGTCACCATAGACATCATCCAAG---CCAGGACACTCATTGGGACACATCA 3633218
Query 106764 GAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
|| ||| | || | | ||| || | ||||||||| | ||| |||||||| || |
Sbjct 3633217 AAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAGAGC 3633160
Query 106822 TGAAAAGAGATCTCT-ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| || | |||||| ||| || | ||||| | ||| || || ||| | ||||| ||
Sbjct 3633159 CAAGAACAAATCTCTGGCACGGA-CTTCTTCCTTACCGTGATTCTTTCGCAGCTCAATGA 3633101
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG---AC 106937
| || | | ||| | ||||| ||||| | || | || | || || ||| |
Sbjct 3633100 ATTCAAAAACATCATCATGCCAAGGCTCCAAGTACATGGCAAAAGCACCTGGTCGCTTAT 3633041
Query 106938 GCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 106997
||| | |||| ||||| | || || || || || | | ||| |||| |||||
Sbjct 3633040 TACCACCCTGATCAACATATCTAGCAGTATTATTGAAAACTCTCAACATGGGAACAATAC 3632981
Query 106998 CATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGT 107057
| | ||| ||| || || || ||| || | | || | | || ||| |
Sbjct 3632980 CGTTTGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGATATTATGAACAC 3632921
Query 107058 GCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGA 107117
|| |||||||| ||||| ||||||| || ||||| | | | ||| | || |
Sbjct 3632920 TCAAACCAATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAAAGTATCGTAAA 3632861
Query 107118 TACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTG 107177
| || | || || || ||||| || | | ||||||| |||||| || || | |
Sbjct 3632860 TGCCATCTATAGAATCGTCCTTCATGTTAACCAAGAAGCAAGAGGACATTTGAGGCTTGG 3632801
Query 107178 GTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTTGGGACATCTTG 107236
| |||||||||||| | || || || | || || | || |||| ||| ||||| | |
Sbjct 3632800 GAGTACCAGCATTGTACAGAGTGGGGGAGGCATGTGT-AAAATACTTTTGAGACATGTAG 3632742
Query 107237 TCGTATGTCTC 107247
| |||||| ||
Sbjct 3632741 TTGTATGTTTC 3632731
Score = 98.7 bits (108), Expect = 1e-15
Identities = 156/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| | || ||||| || || || | ||| |||||||| || ||
Sbjct 3220016 GCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGTCAGACCA 3219957
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
|||||||| || |||||||||||||| | ||| | ||||| || ||||||||||||
Sbjct 3219956 GGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAAGAAGATA 3219897
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGA--GACTTTGTGTCAA 117451
||||| || ||||| |||| || ||||| || || | | || || | | |||
Sbjct 3219896 CCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTG-GACTGATCATCAG-CAA 3219839
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGG 117491
|||| | ||||| | |||||||||| |||||||||
Sbjct 3219838 TCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGG 3219799
>seq1
Length=5930846
Score = 104 bits (114), Expect = 3e-17
Identities = 282/432 (65%), Gaps = 0/432 (0%)
Strand=Plus/Plus
Query 105580 TGCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATG 105639
||| || | ||| | ||||||||| || || || | || | ||||| | || | |||
Sbjct 4965799 TGCTTTCGTTCGTAAATAGTACATTCCTGTTTTTAACCCCTTCTTCCAGCCATAAAAATG 4965858
Query 105640 CATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTG 105699
|||| | ||| || || ||| ||| |||||||| ||||||||| ||| |||
Sbjct 4965859 CATACTCGTGAGTTTTCCTGCAGTAGGATTTTTCATGAAAATATTCATACTCTGAGACTG 4965918
Query 105700 GTCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGATTTCCCA 105759
||||| | || ||||| | || ||||| ||||| | | |||| | | ||||||
Sbjct 4965919 ATCAATATAACGGCCACGGTCAGCTGCCATGTCAATAATAACCTTTTGGCTCAATTCCCA 4965978
Query 105760 CACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACC 105819
| || || | || || | || | || || || | ||| |||||||| || ||
Sbjct 4965979 GGCAGTCTTATATATATCTTTCAGCTCCTTGGGAATCTCGGGGATGTTTTGAATAGAGCC 4966038
Query 105820 CCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATC 105879
|| | | | || | || | | ||||| || ||| || | || | | || ||
Sbjct 4966039 ATCCTCGCTAATAATCATATTCCTGATATCATTATTCCACAGCCTAAGTTGCACAAGGTC 4966098
Query 105880 ATTGACGAGATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGAT 105939
|| || || | || |||||||| || || || | || | ||| ||||||
Sbjct 4966099 CTTCACTAGGTACTCGTTGACAACTTGGAATTCACCAGAAAGTACACGCCTCGCATAGAT 4966158
Query 105940 GTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGT 105999
|||| ||| |||||||||||||||||| ||| | ||||| | || || |||||
Sbjct 4966159 ATTCGATGTGATTGGTTCAAAGCATTCATTAAAACCAAGAATTTGCGATGTTGAAGCTGT 4966218
Query 106000 TGGCATTGGTGC 106011
|||||||||||
Sbjct 4966219 GGGCATTGGTGC 4966230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980770500960
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