Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 9e-17
>seq3
Length=2773601
Score = 102 bits (112), Expect = 9e-17
Identities = 431/668 (65%), Gaps = 12/668 (2%)
Strand=Plus/Plus
Query 154443 ATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTG 154502
||| |||| || |||||||| || ||||| | ||||| | | | || | || ||
Sbjct 478957 ATGATTCCTCTCGGCAGTTGTACCATGAAGCTGAATGCTACCGTACAAATGGCTCCAGTT 479016
Query 154503 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACAGACCATGGGTTA 154561
| ||| ||||||| | | | || || | | ||||| ||| || ||| ||| ||
Sbjct 479017 ACCTGGCCCGAGTTTGGTCAAATCCACCCTTTTGCTCCTATCGATCAAG-CCAAGGGATA 479075
Query 154562 TCAGAAAATTATAGATGACTTACAGAAATGGTTATG-TGATATCACAGGGTTTGATTCTA 154620
||||| || | ||| ||| | | | | || ||||||||| || |||||| |||
Sbjct 479076 TCAGACTCTTGTTAGTGAATTAGA-AGCCGATCTTGCTGATATCACTGGTTTTGATGCTA 479134
Query 154621 TATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAG 154680
|| | ||||||||| | || | |||||||| | ||| || || | |||| |
Sbjct 479135 CCTCGCTTCAACCTAACTCGGGTGCTCAGGGTGAATTTGCCGGTCTCAAGGTCATCCGTG 479194
Query 154681 CATACCATCAAGGATCA-GGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCA 154739
| |||| || | | || | | | | | || | ||| | || || | || ||
Sbjct 479195 CCTACC-TCGACTCTATTGGTCAAGGTCACCGTGATATCTGTATTATTCCTGTTTCTGCC 479253
Query 154740 CATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGT 154799
|||||||| || || || ||||| |||||| || | || || || ||||||||||
Sbjct 479254 CATGGAACCAACCCAGCCTCTGCTGCCATGGCTGGTTTCAAGGTCGTTTCTGTCAAGTGT 479313
Query 154800 GATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT- 154858
| |||| | | ||| | ||| |||| || || | | | ||||
Sbjct 479314 ACCAACAATGGAGAGCTTGACTTGGTCGATTTAGAAGCTAAGGC--TGAGAAGTACAAGG 479371
Query 154859 -TGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACA 154917
| | || | || ||||||||| || || ||||| ||||||| || || ||
Sbjct 479372 ATAAGCTTGCTGCTACTATGATTACCTATCCTTCTACTTATGGTGTGTTCGAGCCTGGTG 479431
Query 154918 TTA-GACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCA 154976
| | || || || | |||| || || |||| ||||| ||||| | ||||||||
Sbjct 479432 TGAAGAGAGCCAT-TGAGATTGTCCACTCTCATGGAGGTCAAGTATACATGGATGGAGCC 479490
Query 154977 AATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCAT 155036
|| | |||||||| | || || | || ||||| ||| || |||||||| ||
Sbjct 479491 AACATGAATGCACAAATCGGTCTCACTTCTCCCGGTGAGATTGGAGCTGATGTATGCCAC 479550
Query 155037 CTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCT 155096
| ||||| || || || ||||||||||| || || ||||| ||||| || || ||||||
Sbjct 479551 TTGAACTTGCACAAGACTTTCTGTATTCCTCACGGTGGTGGTGGTCCAGGTGTCGGTCCT 479610
Query 155097 ATAGGTGT 155104
|| ||||
Sbjct 479611 ATCTGTGT 479618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212771039360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |