Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3 102 9e-17 >seq3 Length=2773601 Score = 102 bits (112), Expect = 9e-17 Identities = 431/668 (65%), Gaps = 12/668 (2%) Strand=Plus/Plus Query 154443 ATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTG 154502 ||| |||| || |||||||| || ||||| | ||||| | | | || | || || Sbjct 478957 ATGATTCCTCTCGGCAGTTGTACCATGAAGCTGAATGCTACCGTACAAATGGCTCCAGTT 479016 Query 154503 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACAGACCATGGGTTA 154561 | ||| ||||||| | | | || || | | ||||| ||| || ||| ||| || Sbjct 479017 ACCTGGCCCGAGTTTGGTCAAATCCACCCTTTTGCTCCTATCGATCAAG-CCAAGGGATA 479075 Query 154562 TCAGAAAATTATAGATGACTTACAGAAATGGTTATG-TGATATCACAGGGTTTGATTCTA 154620 ||||| || | ||| ||| | | | | || ||||||||| || |||||| ||| Sbjct 479076 TCAGACTCTTGTTAGTGAATTAGA-AGCCGATCTTGCTGATATCACTGGTTTTGATGCTA 479134 Query 154621 TATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAG 154680 || | ||||||||| | || | |||||||| | ||| || || | |||| | Sbjct 479135 CCTCGCTTCAACCTAACTCGGGTGCTCAGGGTGAATTTGCCGGTCTCAAGGTCATCCGTG 479194 Query 154681 CATACCATCAAGGATCA-GGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAGCA 154739 | |||| || | | || | | | | | || | ||| | || || | || || Sbjct 479195 CCTACC-TCGACTCTATTGGTCAAGGTCACCGTGATATCTGTATTATTCCTGTTTCTGCC 479253 Query 154740 CATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGT 154799 |||||||| || || || ||||| |||||| || | || || || |||||||||| Sbjct 479254 CATGGAACCAACCCAGCCTCTGCTGCCATGGCTGGTTTCAAGGTCGTTTCTGTCAAGTGT 479313 Query 154800 GATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATT- 154858 | |||| | | ||| | ||| |||| || || | | | |||| Sbjct 479314 ACCAACAATGGAGAGCTTGACTTGGTCGATTTAGAAGCTAAGGC--TGAGAAGTACAAGG 479371 Query 154859 -TGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACA 154917 | | || | || ||||||||| || || ||||| ||||||| || || || Sbjct 479372 ATAAGCTTGCTGCTACTATGATTACCTATCCTTCTACTTATGGTGTGTTCGAGCCTGGTG 479431 Query 154918 TTA-GACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCA 154976 | | || || || | |||| || || |||| ||||| ||||| | |||||||| Sbjct 479432 TGAAGAGAGCCAT-TGAGATTGTCCACTCTCATGGAGGTCAAGTATACATGGATGGAGCC 479490 Query 154977 AATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCAT 155036 || | |||||||| | || || | || ||||| ||| || |||||||| || Sbjct 479491 AACATGAATGCACAAATCGGTCTCACTTCTCCCGGTGAGATTGGAGCTGATGTATGCCAC 479550 Query 155037 CTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCT 155096 | ||||| || || || ||||||||||| || || ||||| ||||| || || |||||| Sbjct 479551 TTGAACTTGCACAAGACTTTCTGTATTCCTCACGGTGGTGGTGGTCCAGGTGTCGGTCCT 479610 Query 155097 ATAGGTGT 155104 || |||| Sbjct 479611 ATCTGTGT 479618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579212771039360