Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3 105 8e-18 >seq3 Length=2773601 Score = 105 bits (116), Expect = 8e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATAT 159604 || ||||||||| ||||| ||||| ||||||| || || | | | || || || Sbjct 479385 TACTATGATTACCTATCCTTCTACTTATGGTGTGTTCGAGCCTGGTGTGAAGAGAGCCAT 479444 Query 159605 GTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCAC 159664 | ||||||| || |||| ||||| ||||| | ||||| || || | ||||||| Sbjct 479445 -TGAGATTGTCCACTCTCATGGAGGTCAAGTATACATGGATGGAGCCAACATGAATGCAC 479503 Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724 | | ||||| | || |||| ||| || |||||||| || | ||||| || | Sbjct 479504 AAATCGGTCTCACTTCTCCCGGTGAGATTGGAGCTGATGTATGCCACTTGAACTTGCACA 479563 Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||| ||||||||||| || || ||||| ||||| || || |||||||| |||| Sbjct 479564 AGACTTTCTGTATTCCTCACGGTGGTGGTGGTCCAGGTGTCGGTCCTATCTGTGT 479618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051170597440