Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 8e-18
>seq3
Length=2773601
Score = 105 bits (116), Expect = 8e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCA-GACAGATAT 159604
|| ||||||||| ||||| ||||| ||||||| || || | | | || || ||
Sbjct 479385 TACTATGATTACCTATCCTTCTACTTATGGTGTGTTCGAGCCTGGTGTGAAGAGAGCCAT 479444
Query 159605 GTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCAC 159664
| ||||||| || |||| ||||| ||||| | ||||| || || | |||||||
Sbjct 479445 -TGAGATTGTCCACTCTCATGGAGGTCAAGTATACATGGATGGAGCCAACATGAATGCAC 479503
Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATA 159724
| | ||||| | || |||| ||| || |||||||| || | ||||| || |
Sbjct 479504 AAATCGGTCTCACTTCTCCCGGTGAGATTGGAGCTGATGTATGCCACTTGAACTTGCACA 479563
Query 159725 AGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||| ||||||||||| || || ||||| ||||| || || |||||||| ||||
Sbjct 479564 AGACTTTCTGTATTCCTCACGGTGGTGGTGGTCCAGGTGTCGGTCCTATCTGTGT 479618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051170597440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |