Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 9e-28
>seq3
Length=2773601
Score = 138 bits (152), Expect = 9e-28
Identities = 162/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || ||||| |||||||| ||||| ||||||||||| | | |||||| |
Sbjct 154108 ACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGACAAGGTTCTGCC 154049
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || ||||||||||| ||||| || | | ||||| || || ||||| ||||| ||
Sbjct 154048 ATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATACCTTCCTT 153989
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|||||||| || || ||| | || | ||| ||||| | || || ||||||||||
Sbjct 153988 GTCTTGAATCTTGGTCTTGACATTGTCGATAGTATCAGAGGACTCAACCTCAAGAGTGAT 153929
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472
|| || || || | || ||||| || || ||||| ||
Sbjct 153928 GGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCATTGT 153890
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
||||| || || || ||||| ||||| || ||||| |||| || ||| | | |||| ||
Sbjct 154785 ACTAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCATCCTCG 154726
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| ||||||||| || || |||||||||||||| || || ||||| || || || ||||||
Sbjct 154725 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCCTCCTTGTCTTGA 154666
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||| ||||| | ||| ||||| ||||| | || ||
Sbjct 154665 ATCTTGGTCTTGACGTTATCAATAGTATCAGAGGATTCAACTTCGAGAGTAATAGTCTTA 154606
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || || || || |||||
Sbjct 154605 CCAGTCAAAGTCTTGACGAAGATTTGCAT 154577
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || |||||||| ||||| || || || |||| || ||| | | | || |||
Sbjct 155013 ACCAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGGAGAGAGTACGGCCGTCTTCC 154954
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
||||||||||| || || |||||||||||||| || || ||||| ||||| || ||||||
Sbjct 154953 AATTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 154894
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | ||| ||||| | || ||||| ||||| | || ||
Sbjct 154893 ATCTTAGTCTTGACGTTGTCGATAGTATCAGAGGACTCGACTTCGAGAGTAATAGTCTTA 154834
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || ||||| || || || || |||||
Sbjct 154833 CCAGTCAAAGTCTTGACGAAGATTTGCAT 154805
Score = 129 bits (142), Expect = 5e-25
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| | ||| || || || || ||||| ||||| || |||||||| | | |||||| |
Sbjct 154336 ACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGACAAGGTTCTGCC 154277
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| || ||||||||||| ||||| || | | ||||| || || ||||| ||||| ||
Sbjct 154276 ATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATACCTTCCTT 154217
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
||||||||||| || ||| | || | ||| ||||| | || ||||||||||| |
Sbjct 154216 GTCTTGAATTTTGGTCTTAACATTATCAATAGTATCAGAGGACTCAACTTCAAGAGTAAT 154157
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || || | || ||||| || || |||||
Sbjct 154156 GGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCAT 154121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396278380681428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |