Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq2 156 8e-33
>seq2
Length=4956242
Score = 156 bits (172), Expect = 8e-33
Identities = 482/739 (65%), Gaps = 29/739 (4%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
|| ||||| |||||| |||||||||||||| ||||| || ||| |||||||| |||
Sbjct 3220307 TGATAGTCAGACACTCTCTTCTCAAAGAAGTTGGTCTTGCCAGACAATGAGATGTTTTCC 3220248
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCA---G 47955
||||| |||||||||| | ||||| ||| | | ||||| ||| |
Sbjct 3220247 ATGAAATCAAAGGGGTTGGTAGCATTATATACC----TTA-------CTGTTACCAAGGG 3220199
Query 47956 CAGGTGAT-------CCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGC 48008
| || || | || || |||| ||||||| |||| || || ||||| |
Sbjct 3220198 AAAGTAATAATCTGTCAGCAACAAACTCAATGTATTGGCACATAAGCTTGGCATTCATTC 3220139
Query 48009 CTATGAGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCC 48067
| | || ||| || |||||| | || | |||||||| || || ||||||||
Sbjct 3220138 CCAAAAGACTACATGG-CAAAGCATCAGTCAAGAACTCCTTTTCAATAATAACGGCTTCA 3220080
Query 48068 CCCACAATCTGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAG 48126
| ||||| | || |||| || ||| | ||||| ||||| | | | ||
Sbjct 3220079 GTGATAATCTTTTCAATAACAGACTTCTTAGG-TCTGTTGACAAGGTG---GCCGAAAAG 3220024
Query 48127 CATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCA 48186
|| || ||||| || |||||| |||||| || || ||| | |||| |||||
Sbjct 3220023 CAAACAAGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGT 3219964
Query 48187 GAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAA 48246
||||||||||||| || | || || | |||||| || || || || ||||||||
Sbjct 3219963 CAGACCAGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAA 3219904
Query 48247 GAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTC 48306
|||||| ||||| || || || || || ||| | ||| | |||| | | | ||
Sbjct 3219903 GAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGGACTGATCATC 3219844
Query 48307 TGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366
| ||||| || |||||||| ||||||||||| || ||||| || | || || ||
Sbjct 3219843 AGCAATCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATATTGTCAATAGC 3219784
Query 48367 CCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTA 48426
|||| | || ||| || ||| | ||| || | || || |||
Sbjct 3219783 ATGGAACAAAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATAAGTAATGAGTA 3219724
Query 48427 CATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAA 48486
|||| | || | ||||| || || ||||| ||||| || | | |||||
Sbjct 3219723 GGTCTCTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACACTTTGCCTCGGG 3219664
Query 48487 CACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGC 48546
| || ||||| |||||||| || | || ||||| ||||| || |||||||||||
Sbjct 3219663 AATTTGAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATACCATCTGAAGC 3219604
Query 48547 AGCAAAGAAGGCAAGGACA 48565
||||||||| |||||||||
Sbjct 3219603 AGCAAAGAATGCAAGGACA 3219585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532753423360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |