Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq2 170 4e-37
>seq2
Length=4956242
Score = 170 bits (188), Expect = 4e-37
Identities = 562/863 (65%), Gaps = 17/863 (2%)
Strand=Plus/Minus
Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTT 221832
|||| | ||||||| || |||| || | || ||| ||||| ||| ||| |||||
Sbjct 3633450 GTTGGAGGACTTGATAGTACCCAAGTTTTGTTGGTTACTCTTGCTATTACAAGCATCCTT 3633391
Query 221833 GTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTC 221892
|| ||||| || || |||||||| ||||| | ||||| | ||| || |
Sbjct 3633390 ATAAAGCATGAATGGGTTACCAGTCTCAGTTTGAGCTTCGAGAATAGCATACCACAGCTT 3633331
Query 221893 TCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATAC--CCGGTATAGAGC 221950
| ||| | | || || || || ||| || ||| || ||| | || |||||
Sbjct 3633330 TTGGGCCTTGATGGTTCTTCTGCCTCTACCTTC---CTTCTCGTACTTCTCATAAAGAGC 3633274
Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010
| | |||| ||||| || | || |||| ||| |||||| ||||||||||| |
Sbjct 3633273 AA--CGAACTCGTCACCATAGACATCATCCAAGCCAGGACACTCATTGGGACACATCAAA 3633216
Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070
|||| | || ||| | ||||| |||| |||||| | ||| || ||||| || |||
Sbjct 3633215 GTCCAATCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAGAGCCAAG 3633156
Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130
|| | |||||||| || || ||| |||| || || | ||| || | || |||
Sbjct 3633155 AACAAATCTCTGGCACGGACTTCTTCCTTACCGTGATTCTTTCGCAGCTCAATGAATTCA 3633096
Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190
|||| ||| | ||||| ||||||| || | ||| | ||| || |||||||| || |||
Sbjct 3633095 AAAACATCATCATGCCAAGGCTCCAAGTACATGGCAAAAGCACCTGGTCGCTTATTACCA 3633036
Query 222191 CCCTGATCCACCATCCTCT-CCAG-AGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGT 222248
||||||| || ||| ||| ||| | ||||| | | | | || || | ||||
Sbjct 3633035 CCCTGAT-CAACAT-ATCTAGCAGTATTATTGAAAACTCTCAACATGGGAACAATACCGT 3632978
Query 222249 TGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACA 222308
| || |||||| || || |||||| | || || | | ||| || ||
Sbjct 3632977 TTGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGATATTATGAACACTCA 3632918
Query 222309 TGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGC 222368
|| |||||||| || || || |||| ||| || |||| | ||| || ||||
Sbjct 3632917 AACCAATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAAAGTATCGTAAATGC 3632858
Query 222369 CCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGG 222428
| || ||||| || ||||| | ||| | || || ||||| ||||| |||| |||| |
Sbjct 3632857 CATCTATAGAATCGTCCTTCATGTTAACCAAGAAGCAAGAGGACATTTGAGGCTTGGGAG 3632798
Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488
|| || || |||| ||||| ||| |||||||| || |||||| | ||
Sbjct 3632797 TACCAGCATTGTACAGAGTGGGGGAGGCATGTGTAAAATACTTTTGAGACATGTAGTTGT 3632738
Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACA 222548
| || || | | | ||| ||| | || ||||| | || ||||||| ||
Sbjct 3632737 ATGTTTCAATGGCCTTGGTGATATCAGAACCATGAATACCAACAGCTACTCTCATGATCA 3632678
Query 222549 TGTACTGGGGCCTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCA 222605
||| ||||| |||| | | ||| || | || ||||| ||||||| ||||||
Sbjct 3632677 TGTGTTGGGGTCTCTCGGCGATTTTACCATT-AATCT--TGAGCAAGTACGATCTTTCCA 3632621
Query 222606 GAGTCTTGAACCCAAAGTAGTTG 222628
||||||||| || ||||| |||
Sbjct 3632620 AAGTCTTGAAACCGAAGTAATTG 3632598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844753557760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |