Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 4e-14
>seq3
Length=2773601
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || ||||| || | || ||||| |||||||| ||| || | ||
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| ||||| ||||| || || | || ||| |||
Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||||||| ||||| || || ||||| |||||| | ||| || | ||||| |||
Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGT 28762
|||||||| ||||| ||||| ||| ||||
Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| || || || || || || ||||| ||| |||| || | ||
Sbjct 154349 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTCGAAGTCGAGTCCTCT 154408
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| || ||| ||||| ||||| | || ||| |||
Sbjct 154409 GATACTATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAA 154468
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| |||||||||||||| || || ||| | || ||| | ||| | |||| || |||
Sbjct 154469 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAAC 154528
Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757
|||||||| ||||||||||| |||
Sbjct 154529 ATTCAAAAGGAATCTACTCTTCAC 154552
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || ||||| || | || ||||| ||||| || || || | ||
Sbjct 153892 AATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAGGTTGAGTCCTC 153951
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | | || ||||| || || ||||| || || | || ||| ||
Sbjct 153952 TGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCA 154011
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| |||||||| ||||| || || ||||| |||||| | ||| || | ||||| ||
Sbjct 154012 ACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAA 154071
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762
|||||||| ||||||||||| ||| ||||
Sbjct 154072 TATTCAAAAGGAATCTACTCTTCACTTGGT 154101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425404779261516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |