Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 201 7e-46 seq3 188 5e-42 seq2 132 3e-25 seq4 87.8 1e-11 >seq1 Length=5930846 Score = 201 bits (222), Expect = 7e-46 Identities = 369/537 (69%), Gaps = 4/537 (1%) Strand=Plus/Plus Query 474331 AATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGT 474390 ||| ||||||||| | || |||||||| ||||| | |||| | ||||||| || || Sbjct 2277975 AATCGGTATTGATCTTGGTACTACTTATTCATGTGTTGGTGTTATGAAAAATGGAAAGGT 2278034 Query 474391 AGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGA 474450 || || | |||||||| |||||| | | | || || ||||||||| | |||||||| Sbjct 2278035 TGAGATTTTGGCCAATGATCAAGGTCTTCGTATCACCCCCTCATATGTTGCATTTACTGA 2278094 Query 474451 AACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 || | | | | |||||||||||||| | || ||| | |||| ||| |||||| Sbjct 2278095 TGAAGAGCGTTTGGTAGGAGATGCTGCTAAGAACCAGGCTTCTGCTAACACTGCTAATAC 2278154 Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA 474570 |||||| ||| || | |||||||||| ||| | ||| ||||| ||| || Sbjct 2278155 TATTTTCGATATCAAGCGTTTGATTGGTCTTAAGTACTCAGATCAAACTGTTCAAAGAGA 2278214 Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAAT 474630 ||| |||| |||| |||||| || || | |||||| || | | ||| | Sbjct 2278215 TATTAAGCATTTCCCTTATAAGGTTATCAACAAGGATGGTAAGCCTGCTGTTAAAGTCAC 2278274 Query 474631 ACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAA 474690 | | ||||| || ||||| || ||| || |||| | |||||||| | ||| Sbjct 2278275 TTATGGTGGTGAGGAGAAGACCTTTTCTCCCGAAGAAGTTTCCGCCATGGTTTTGGGCAA 2278334 Query 474691 AATGAAACAAACCG-CGAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAATTACT 474748 ||||| | | | |||| || |||| ||||| || ||| |||| || ||||| Sbjct 2278335 GATGAAGGAGATTGCCGAG--GATTATTTGGGTAAGAAGGTTACTCATGCTGTTGTTACT 2278392 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || || || ||||| |||||| ||||||||||||| || || ||||| || | ||||| Sbjct 2278393 GTGCCTGCTTATTTCAATGATGCTCAACGTCAAGCTACCAAGGATGCCGGTACTATTGCT 2278452 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 ||| | | | |||| |||||| |||| || || || || || || |||| || ||| Sbjct 2278453 GGTTTGACTATTTTGCGTATTGTTAACGAGCCCACTGCTGCTGCCATTGCCTACGGT 2278509 Score = 123 bits (136), Expect = 2e-22 Identities = 308/468 (66%), Gaps = 6/468 (1%) Strand=Plus/Plus Query 475700 GAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCA 475759 || ||||||||||| || || || || | || || || || | |||||| Sbjct 2278951 GATATTGTTCTTGTTGGTGGATCTACTCGTATCCCCAAGATTCAATCGATGCTTGAGGAC 2279010 Query 475760 TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGA 475819 | || |||||||| ||| | | || | ||| |||| || |||||||| ||||| Sbjct 2279011 TTCTTCAATGGTAAGAAGCCTTCTAAGGGTATTAATGCTGACGAGGCTGTTGCCTATGGT 2279070 Query 475820 GCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTA 475879 |||||||| ||||| | | |||| || ||| || ||| | || | ||||| Sbjct 2279071 GCTGCTGTTCAAGCCGGTGTTTTGTCTGGT------GAGGAGGGTGTTGATGACATTGTC 2279124 Query 475880 CTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAAT 475939 || | || || | || | | | ||| |||| ||| || || | ||||| || Sbjct 2279125 CTGCTCGATGTTAACCCCTTGACTCTTGGTATTGAGACATCAGGTGGTGTCATGACCAAG 2279184 Query 475940 CTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCT 475999 || ||| || | || ||||||||||| || || || | ||||| ||| | Sbjct 2279185 CTCATTAACCGTAACACTCCTATCCCCACTCGTAAGTCGCAAATCTTTTCGACTGCCGTT 2279244 Query 476000 GATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGAT 476059 || || ||| | ||||| || ||| | ||||| |||||| | | | |||| || Sbjct 2279245 GACAACCAACCCACTGTTCTTATTCAAGTGTTTGAGGGTGAACGTACTCTTTCTAAGGAC 2279304 Query 476060 AATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCT 476119 |||||| ||||| | || | || |||||||||||||||||| | || |||||| Sbjct 2279305 AATAACCGTCTTGGTAAGTTCGAGCTCACTGGTATTCCTCCTGCTCCCCGTGGTGTTCCT 2279364 Query 476120 CAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTT 476167 |||||||| || || ||||| | ||||| ||||| || || || ||| Sbjct 2279365 CAAATTGAGGTCACCTTTGAGCTCGATGCCAATGGAATCCTCAAGGTT 2279412 >seq3 Length=2773601 Score = 188 bits (208), Expect = 5e-42 Identities = 409/603 (68%), Gaps = 27/603 (4%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG--TTTGGCAAAATGGTAAAGT 474390 ||||||||||||| || ||||| ||| |||||||| ||| ||| || || ||| Sbjct 1434280 TTGGTATTGATTTGGGTACTACCTACTCCTGTGTAGCCCACTTTTCCAA--TGATAGAGT 1434337 Query 474391 AGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGA 474450 || || |||||||||||||||||||| ||||| || || || | || |||| || || Sbjct 1434338 TGAGATCATTGCCAATGACCAAGGTAACAGAACTACTCCTTCTTTCGTCGCTTTCACCGA 1434397 Query 474451 AACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATAC 474510 | || | | | ||||| ||||||||||| |||||||||| || |||| || || Sbjct 1434398 TTCCGAGCGTTTAATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCTGCCAACAC 1434457 Query 474511 TATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA 474570 | |||| |||||||| | ||||||||| | || | |||| | |||||| ||| Sbjct 1434458 TGTTTTCGATGCTAAGCGTTTGATTGGTAGAAAGTACACTGATCCTGAGGTCCAAAGTGA 1434517 Query 474571 TATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CA 474628 ||| || | || || ||||| | | | ||| || || | || ||| | Sbjct 1434518 TATTAAGCACTTCCCCTTCAAGGTCGTTGACAAGGCTGGCAAGCCCCAAATCCAAGTCGA 1434577 Query 474629 ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCC 474688 | || | ||||| || || | || ||| |||| ||||| ||||| | || Sbjct 1434578 GTTCAAG--GGTGAGGAGAAGGTCTTCACTCCCGAAGAAATCTCTTCTATGGTCCTCACC 1434635 Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTGG-----ACAAGAAGTAACTGATGCAGTA 474742 || ||||| | || || ||| | |||||| || || ||| || || Sbjct 1434636 AAGATGAAGGAGACTGCTGAG--GGTTTCTTGGGTGGTACTGTTAGCAAC----GCTGTC 1434689 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 |||||||| || || || || || ||||||||||||||||| || || ||||| || Sbjct 1434690 ATTACTGTCCCTGCCTACTTCAACGATTCTCAACGTCAAGCCACCAAGGATGCTGGTCTT 1434749 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| |||||||| ||| | ||||| || || || || || || || || |||| || Sbjct 1434750 ATTGCTGGTCTTAACGTTCTCCGTATCATCAACGAGCCTACTGCCGCTGCTATTGCCTAC 1434809 Query 474863 GGTCTTGATAAGAATTCTGA--CAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAG 474917 ||| | || ||||| ||||| | ||||| || || | |||||||||| |||| | Sbjct 1434810 GGTTTGGACAAGAAGTCTGATGCCGAGAAG--AACGTCCTTATCTTTGATTTGGGTGGTG 1434867 Query 474918 GTA 474920 ||| Sbjct 1434868 GTA 1434870 Score = 183 bits (202), Expect = 2e-40 Identities = 555/849 (65%), Gaps = 14/849 (2%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 || || ||| ||||| || | || || ||||| ||| | || | |||||||| ||| Sbjct 1434897 GAGGACGGTATTTTCGAGGTCAAGGCCACTGCTGGTGATACCCACTTGGGTGGTGAGGAT 1434956 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 || ||| | | ||||| | || | || | || |||||||| || || || | Sbjct 1434957 TTCGATCACCGTCTTGTCAACCAC--TTCGTCGCCGAGTTCAAGAGAAAGAACAAGAAGG 1435014 Query 475458 ATCTTTCAACATCTGCTAAAG--CATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 ||||||| || | | |||| | | |||||| | ||||| || ||||| ||||| || Sbjct 1435015 ATCTTTCTAC--CAACCAAAGAGCTCTTAGACGTTTGAGAACCGCCTGTGAGCGTGCCAA 1435072 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 | || || | |||||| || |||||||| || | ||| | || ||| | | || || || Sbjct 1435073 GAGAACTTTGTCTTCTTCTGCTCAAACTTCTATCGAAATCGACTCTTTGTACGAGGGTAT 1435132 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 ||||| | ||| ||| || | |||| ||| || || | ||| ||| | || || Sbjct 1435133 TGATTTCTACACTTCTATCACCCGTGCTAGATTCGAGGAGTTGTGTCAAGATTTGTTCAG 1435192 Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695 | || || || || ||||| | |||||| | || || || ||||||| || || Sbjct 1435193 ATCTACCATCGAGCCTGTTGAGAAGGTTCTCCGTGACTCCAAGATTGACAAGTCTTCTGT 1435252 Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTC 475755 | || ||||| ||||| || ||||| || | || || || | | | | |||| Sbjct 1435253 TAACGAGATTGTCCTTGTTGGTGGTTCTACCCGTATCCCCAAGGTTCAAAAGCTTGTTTC 1435312 Query 475756 ATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATA 475815 | || || ||||| || || | | || || ||||| || ||||| || Sbjct 1435313 CGACTTCTTCAACGGTAAGGAGCCCAACAGATCCATCAACCCCGATGAGGCCGTTGCCTA 1435372 Query 475816 TGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAATCAGACGAGAAACTAAATAAT 475873 ||| || ||||| ||||| |||||| | || ||| || | | | | ||| || | | Sbjct 1435373 TGGTGCCGCTGTTCAAGCCGCTATTCTTTCTGGTGACACTTCTTCCA-AGACTCAAGACT 1435431 Query 475874 ATTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932 ||| |||||| | || |||| ||||| | ||| | || || | ||| || | || Sbjct 1435432 --TGTTGTTGTTGGATGTCGCTCCTCTTTCTCTTGGTATCGAGACTGCTGGTGGTGTCAT 1435489 Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992 ||| || || || |||||| || | || || ||| || || | | || ||||| Sbjct 1435490 GACCAAGCTCATCCCCAGAAACTCTACCATTCCTACCAAGAAGTCTGAGATCTTCTCCAC 1435549 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 ||| |||| || ||| | ||| ||| ||| | || || ||||| | | || Sbjct 1435550 CTATGCTGACAACCAACCCGGTGTCCTCATTCAAGTTTTCGAGGGTGAGCGTACCAAGAC 1435609 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 || || || ||| ||||| | || | || ||||||||||| ||||| | || Sbjct 1435610 CAAGGACAACAACTTGCTTGGTAAGTTCGAGCTCACTGGTATTCCTCCCGCTCCTCGTGG 1435669 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 ||||||||||| || || ||||| || ||||| || |||||||| | || || |||| Sbjct 1435670 TGTTCCTCAAATCGAGGTCACTTTCGACATTGACGCCAATGGTATCTTGAACGTCTCTGC 1435729 Query 476173 TTGTGATAA 476181 | ||| || Sbjct 1435730 TGTTGAGAA 1435738 Score = 156 bits (172), Expect = 3e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || || | ||||| ||| ||| || || ||| ||||||| | || Sbjct 154114 ACGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGACAAGGT 154055 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| |||||| | |||||| |||||||||||||| | |||||| || |||||||| || Sbjct 154054 TCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATACC 153995 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| |||||| || |||||||||| | | ||||| Sbjct 153994 TTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATAGTATCAGAGGACTCAACCTCAAG 153935 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| ||||| ||||| ||||| Sbjct 153934 AGTGATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTG 153896 Score = 154 bits (170), Expect = 1e-31 Identities = 172/222 (77%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTAC-AAGATGA-AGTGTACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||||||||| || || ||| || |||| | || |||| ||| || ||||||| | Sbjct 154342 ACGAAGACGAAGAACCAAGTGGAGAGTGGA-TTCCTTTTGAATG-TTGTAATCAGACAAG 154285 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 |||||| |||||| | |||||| |||||||||||||| | |||||| || |||||||| Sbjct 154284 GTTCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATA 154225 Query 480669 CCTTCCTTGTCTTGAATCTTTTGT-TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTC 480727 ||||||||||||||||| ||| || || ||| ||||||||||||| | | ||| Sbjct 154224 CCTTCCTTGTCTTGAAT-TTTGGTCTTAACATTATCAATAGTATCAGAGGACTCAACTTC 154166 Query 480728 AAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct 154165 AAGAGTAATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTG 154124 Score = 132 bits (146), Expect = 3e-25 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTAC-AAGATGA-AGTGTACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 ||| |||||||| || ||| || |||| | || |||| ||| || || || | ||| Sbjct 154798 ACGGAGACGGAGGACTAAGTGGAGAGTGGA-TTCCTTTTGAATG-TTGTAGTCGGAGAGA 154741 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | | ||| || |||||||| ||||| ||||| | ||| ||||| || |||||||| Sbjct 154740 GTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATA 154681 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 || ||||||||||||||||| ||||| ||||||||||||| | | | ||| Sbjct 154680 CCCTCCTTGTCTTGAATCTTGGTCTTGACGTTATCAATAGTATCAGAGGATTCAACTTCG 154621 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || |||||||| ||||| || | |||||| ||||| ||||| Sbjct 154620 AGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTG 154580 Score = 125 bits (138), Expect = 5e-23 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||||||||| || | || || ||| ||| || | ||||| || | ||||| Sbjct 155026 ACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGGAGAGAGT 154967 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||| | |||||| ||||| ||||| | ||| ||||| || |||||||| || Sbjct 154966 ACGGCCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACC 154907 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||||||||||||||| ||||| || |||||||||| | ||| || Sbjct 154906 TTCCTTGTCTTGAATCTTAGTCTTGACGTTGTCGATAGTATCAGAGGACTCGACTTCGAG 154847 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| ||||| || | |||||| ||||| ||||| Sbjct 154846 AGTAATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTG 154808 Score = 107 bits (118), Expect = 1e-17 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || | ||||| ||| ||| || || || || || | ||||| Sbjct 154570 ACGGAGACGGAGAACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCGGAAAGAGT 154511 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || |||||||| |||||||| ||||| | |||||| || |||||||| || Sbjct 154510 ACGACCATCCTCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGAGGAATACC 154451 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||||| ||||| || ||| ||||||||||||| | ||| || Sbjct 154450 CTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATAGTATCAGAGGACTCGACTTCGAG 154391 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || | ||||| || || ||||| Sbjct 154390 GGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTG 154352 Score = 107 bits (118), Expect = 1e-17 Identities = 154/211 (73%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||| ||||| || || || ||| |||| ||| || || |||| || |||||| Sbjct 1977687 ACGGAGGACAAGGTGGAGAGTCGACTC-CTTTTGAATG-TTGTAGTCAGAAAGGGTTCTG 1977630 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || |||||||| || || || ||||||||||||||||| || |||||||| ||| Sbjct 1977629 CCATCCTCGAGTTGCTTACCGGCGAAGATAAGACGTTGTTGATCTGGGGGAATTCCCTCC 1977570 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGT 480733 |||||||| ||||| ||||| ||||| || || | | | | || ||||| Sbjct 1977569 TTGTCTTGGATCTTGGTCTTGACGTTGTCAATGGTGTCGGAAGACTCGA-CCTCGAGGGT 1977511 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAA 480764 || || ||||| || || ||||| |||||| Sbjct 1977510 GATGGTCTTACCAGTAAGGGTCTTGACGAAA 1977480 >seq2 Length=4956242 Score = 132 bits (146), Expect = 3e-25 Identities = 163/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| ||||| || || ||| || || | || || |||| || || Sbjct 2345905 ACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAAAGGGT 2345964 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| ||||||||||| |||||||| || | |||||||||||| || |||||||| Sbjct 2345965 ACGACCATCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCC 2346024 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||||| ||||| |||||| || ||||| || | | | || |||| Sbjct 2346025 CTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCGGAAGACTCAA-CCTCAA 2346083 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| ||||| |||||||| || ||||| ||||||||||| Sbjct 2346084 GGGTGATAGTCTTACCGGTAAGGGTCTTGACGAAAATTTG 2346123 >seq4 Length=2277569 Score = 87.8 bits (96), Expect = 1e-11 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | |||||||| || || || || || |||||||||||||| ||||| |||| Sbjct 1737231 ATGCCGTTGTCACTGTTCCTGCTTACTTCAACGACTCTCAACGTCAAGCTACTAAGGATG 1737172 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || ||||| ||| | || ||||| ||| || | || || || || || || || Sbjct 1737171 CTGGTCAAATTGTTGGTTTGAACGTTTTGCGTGTTGTCAACGAGCCTACTGCCGCTGCTT 1737112 Query 474855 TTGCTTATGGTCTTGATAAGA 474875 | ||||||||| | || |||| Sbjct 1737111 TGGCTTATGGTTTGGACAAGA 1737091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268179028420592