Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq2 150 9e-32 >seq2 Length=4956242 Score = 150 bits (166), Expect = 9e-32 Identities = 264/382 (69%), Gaps = 2/382 (1%) Strand=Plus/Minus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 ||| ||||| | ||| |||||| | || || ||| ||| ||| || || || || Sbjct 3633231 ATTGGGACACATCAAAGTCCAATCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCAGG 3633172 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||| | || | || |||||||| || | | |||||| || |||||||||||| Sbjct 3633171 AATCCATAGAGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTACCGTGATTCTTTCG 3633112 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 || || | ||| ||||||| ||| ||||| || || || || || |||||| ||| Sbjct 3633111 CAGCTCAATGAATTCAAAAACATCATCATGCCAAGGCTCCAAGTACATGGCAAAAGCACC 3633052 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | || || ||||| ||||| || ||||| ||||| | |||||||||| ||||||| Sbjct 3633051 TGGTCGCTTATTACCACCCTGATCAACATATCTAGCAGTATTATTGAAAACTCTCAACAT 3632992 Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187 ||||| | || |||| ||||| || | | ||| | ||| || || | | || Sbjct 3632991 GGGAACAATACCGTTTGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGAT 3632932 Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAA 26246 || ||| || | ||| || |||||||| | |||||||| |||||| ||| || Sbjct 3632931 ATTATGAACACTCAAACCAATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAA 3632872 Query 26247 CTGTATCGAAAATTCCTTTTAT 26268 |||||| |||| || | ||| Sbjct 3632871 -AGTATCGTAAATGCCATCTAT 3632851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039987664300