Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 9e-32
>seq2
Length=4956242
Score = 150 bits (166), Expect = 9e-32
Identities = 264/382 (69%), Gaps = 2/382 (1%)
Strand=Plus/Minus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
||| ||||| | ||| |||||| | || || ||| ||| ||| || || || ||
Sbjct 3633231 ATTGGGACACATCAAAGTCCAATCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCAGG 3633172
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | || | || |||||||| || | | |||||| || ||||||||||||
Sbjct 3633171 AATCCATAGAGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTACCGTGATTCTTTCG 3633112
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
|| || | ||| ||||||| ||| ||||| || || || || || |||||| |||
Sbjct 3633111 CAGCTCAATGAATTCAAAAACATCATCATGCCAAGGCTCCAAGTACATGGCAAAAGCACC 3633052
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| || || ||||| ||||| || ||||| ||||| | |||||||||| |||||||
Sbjct 3633051 TGGTCGCTTATTACCACCCTGATCAACATATCTAGCAGTATTATTGAAAACTCTCAACAT 3632992
Query 26128 TGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAAT 26187
||||| | || |||| ||||| || | | ||| | ||| || || | | ||
Sbjct 3632991 GGGAACAATACCGTTTGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGAT 3632932
Query 26188 ATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAA-TCTGAAA 26246
|| ||| || | ||| || |||||||| | |||||||| |||||| ||| ||
Sbjct 3632931 ATTATGAACACTCAAACCAATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAA 3632872
Query 26247 CTGTATCGAAAATTCCTTTTAT 26268
|||||| |||| || | |||
Sbjct 3632871 -AGTATCGTAAATGCCATCTAT 3632851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039987664300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |