Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq3 140 6e-28
>seq3
Length=2773601
Score = 140 bits (154), Expect = 6e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || || | ||| | || || ||| || |||||
Sbjct 154350 ATACCACCACGAAGACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGTAATCA 154291
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || ||||| |||||||||||||| | ||| |||||||| ||
Sbjct 154290 GACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGA 154231
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| | || |||||| |||||||| || || ||
Sbjct 154230 GGAATACCTTCCTTGTCTTGAATTTTGGTCTTAACATTATCAATAGTATCAGAGGACTCA 154171
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| ||||||||||| |||||||| | || || | ||| || |||||
Sbjct 154170 ACTTCAAGAGTAATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCAT 154121
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || | || || || | ||||| || || |||||| |||||
Sbjct 154122 ATACCACCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCA 154063
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || || ||||| |||||||||||||| | ||| |||||||| ||
Sbjct 154062 GACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGTCTGGA 154003
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| || || | || ||||| |||||||| || || ||
Sbjct 154002 GGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATAGTATCAGAGGACTCA 153943
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
|| || ||||| ||||| |||||||| | || || | ||| || ||||||
Sbjct 153942 ACCTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCATT 153892
Score = 113 bits (124), Expect = 8e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | || || | ||||| || | ||||| || || ||| || || ||
Sbjct 154578 ATACCACCACGGAGACGGAGAACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCG 154519
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || || | ||| ||||||||||| || | ||| |||||||| ||
Sbjct 154518 GAAAGAGTACGACCATCCTCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGA 154459
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || ||||| || ||| | || |||||| |||||||| || || ||
Sbjct 154458 GGAATACCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATAGTATCAGAGGACTCG 154399
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || || ||||| || ||||| || || || | || || |||||
Sbjct 154398 ACTTCGAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 154349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135954743200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |