Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-24 >seq1 Length=5930846 Score = 131 bits (144), Expect = 2e-24 Identities = 105/127 (83%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 ||||| || | |||||| | |||||||| || |||||||||||| ||||||| |||| Sbjct 274992 CTCTTCGAAATTATCCTCACTGCCAACTATCTTGACATCAAGCCTTTGCTCGAAGTTGGA 275051 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| |||| ||||| ||||||||||||||| || ||||| ||| | ||||||||| Sbjct 275052 TGCAAGACTGTAGCCAATATGATCAAGGGCAAGAGCCCTGAGGATATCAGAAAGACCTTT 275111 Query 1592288 AACATCA 1592294 ||||||| Sbjct 275112 AACATCA 275118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107138871741268