Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 2e-16
>seq3
Length=2773601
Score = 100 bits (110), Expect = 2e-16
Identities = 156/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 110259 ATAAGAGATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCG 110318
|||| | || | ||||||||| || || || || | || || || ||||| || | |
Sbjct 153879 ATAACAACTTCACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTG 153938
Query 110319 AAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCG 110378
| ||| | |||||| ||| | | || || |||||| ||||| |||||
Sbjct 153939 AGGTTGAGTCCTCTGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTA 153998
Query 110379 TGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAA 110438
| || || |||||||||||||||| ||| ||||| || | || |||| ||||||
Sbjct 153999 TTCCTCCAGACCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCT 154058
Query 110439 TGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| | |||||||| |||||||| |||||||| | ||| ||||
Sbjct 154059 TGTCTGATTACAATATTCAAAAGGAATCTACTCTTCACTTGGT 154101
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || || || || | || || || |||||||| | ||| ||| |
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | || || || ||| ||||| ||||| | || || |||
Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||||||||||| ||| ||||| || | || |||| |||||| || | |||||||||
Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
|||||||| ||||| || | ||| ||||
Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| || || || || || ||||| ||| ||||| ||| |
Sbjct 154349 ATGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTCGAAGTCGAGTCCTCT 154408
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | || || ||||| ||||| || || | || || |||
Sbjct 154409 GATACTATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAA 154468
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||||||||| | ||| ||||| || || ||||||| | || | | || ||||||
Sbjct 154469 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAAC 154528
Query 110453 ATTCAAAAAGAATCTAC 110469
|||||||| ||||||||
Sbjct 154529 ATTCAAAAGGAATCTAC 154545
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841579873972
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |