Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq3 132 8e-26
>seq3
Length=2773601
Score = 132 bits (146), Expect = 8e-26
Identities = 154/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| |||| || | || || || || |||||| |||| || || |
Sbjct 154122 TGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCTG 154181
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || | ||||| ||| || ||||| ||||| || || ||||
Sbjct 154182 ATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 154241
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| |||||||| ||||| |||||||| ||| ||||| || | ||||| || |
Sbjct 154242 AAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAACA 154301
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| ||| |||| || ||
Sbjct 154302 TTCAAAAGGAATCCACTCTCCACTTGGT 154329
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| |||| || | || || || || || ||| |||| || || |
Sbjct 153894 TGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTGAGGTTGAGTCCTCTG 153953
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| | ||||| || | || || ||| || ||||| ||||| || || ||||
Sbjct 153954 ATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAAC 154013
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| |||||||| ||||| |||||||| ||| ||||| || | ||||| ||||
Sbjct 154014 AAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAATA 154073
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| ||| | || || ||
Sbjct 154074 TTCAAAAGGAATCTACTCTTCACTTGGT 154101
Score = 87.8 bits (96), Expect = 3e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || || || ||||| || || || | || || || |
Sbjct 154350 TGCAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTCGAAGTCGAGTCCTCTG 154409
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| | ||||| || | ||| || ||| || || || ||||| || || ||||
Sbjct 154410 ATACTATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAAC 154469
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| || ||||| ||||| ||| | || ||| | | || | | || || || |
Sbjct 154470 AAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAACA 154529
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| ||| | || |||||
Sbjct 154530 TTCAAAAGGAATCTACTCTTCACTTAGT 154557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166360691680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |