Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 1e-11 >seq3 Length=2773601 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/139 (73%), Gaps = 11/139 (8%) Strand=Plus/Minus Query 81644 AGAGTAAATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA------- 81696 |||||| ||||||| || ||||| |||||||| | ||||| | |||||||| Sbjct 154092 AGAGTAGATTCCTTTTGAATATTGTAATCAGACAAGGTTCTGCCATCTTCTAATTGCTTA 154033 Query 81697 ----CAAAGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCT 81752 |||| || ||||||||||| ||||| | || ||||||| ||||||||||| | Sbjct 154032 CCAGCAAAAATAAGTCTTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTC 153973 Query 81753 TTTATATTTTCAATCGTAT 81771 || | ||| || || |||| Sbjct 153972 TTGACATTGTCGATAGTAT 153954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903411154829440