Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
>seq3
Length=2773601
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/208 (70%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512
|| || | ||| ||||| ||||| || ||||| ||| | || |||| ||| ||||
Sbjct 155238 AAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGT--ACGACCGTCTTCGA 155181
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
||||||| || || | ||||| | || ||||| || || ||||| |||||||| ||
Sbjct 155180 GCTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGA 155121
Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
|||| ||||| | |||| ||||| | | ||| || |||| |||| || || |
Sbjct 155120 TCTTGGTCTTGACATTATCAATGGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCTTAC 155061
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || || ||||| || |||||
Sbjct 155060 CAGTGAGGGTCTTGACGAAGATTTGCAT 155033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483420775828960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |