Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 111 4e-19 >seq3 Length=2773601 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || |||||| | || || || ||||| || |||| Sbjct 153908 AAGACCCTCACTGGTAAGACCATCACTCTTGAGGTTGAGTCCTCTGATACTATCGACAAT 153967 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||||| || ||||| ||| || ||| ||||||||||| || Sbjct 153968 GTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGACTTATTTTT 154027 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||||||| || || ||| | |||||||| | || || || ||| Sbjct 154028 GCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAATATTCAAAAGGAATCT 154087 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||| | ||| | | ||||| Sbjct 154088 ACTCTTCACTTGGTTCTTCGTCTTCG 154113 Score = 96.9 bits (106), Expect = 8e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || || || || ||| | ||||| || ||||| || | || Sbjct 154136 AAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCTGATACTATTGATAAT 154195 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || |||||||| || ||||| ||| || ||| ||||||||||| || Sbjct 154196 GTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAACAAAGACTTATTTTT 154255 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| || |||||||| || || ||| | ||||||||| | || || || || Sbjct 154256 GCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAACATTCAAAAGGAATCC 154315 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| ||| | ||| | | ||||| Sbjct 154316 ACTCTCCACTTGGTTCTTCGTCTTCG 154341 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| ||| || | || ||||| || ||||| | ||||| || ||||| Sbjct 154352 CAAATCTTTGTCAAGACCTTGACTGGAAAGACCATCACCCTCGAAGTCGAGTCCTCTGAT 154411 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || || || ||| || ||| ||| Sbjct 154412 ACTATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAACAA 154471 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||||||||| || || ||||| | || ||||| | ||| | |||| |||||| | Sbjct 154472 AGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGTCGTACTCTTTCCGACTACAACATT 154531 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 || || || |||||||||||| | ||| Sbjct 154532 CAAAAGGAATCTACTCTTCACTTAGTT 154558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181820739431684