Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq3 93.3 3e-14
>seq3
Length=2773601
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
|||||||| || || || || | ||||| ||||||||||| | ||| || ||
Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| || ||| | || || |||||| ||||| ||||| | || || |||
Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| ||||||| ||| || || |||||||||||| | ||| || |||||||||
Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300
Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468
|| ||||| ||||| || || || || ||
Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329
Score = 82.4 bits (90), Expect = 6e-11
Identities = 152/223 (68%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 106246 ATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGG 106305
|||| | || | ||||||||| || || || || | ||||| |||||||| || | |
Sbjct 153879 ATAACAACTTCACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTG 153938
Query 106306 AAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCG 106365
| || || ||| || | | | | || || || ||| ||||| |||||
Sbjct 153939 AGGTTGAGTCCTCTGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTA 153998
Query 106366 TGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTA 106425
| || || |||||||| ||||||| ||| || || |||||||||||| | |||
Sbjct 153999 TTCCTCCAGACCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCT 154058
Query 106426 TGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGT 106468
|| |||||||| || ||||| |||||||| || || || ||
Sbjct 154059 TGTCTGATTACAATATTCAAAAGGAATCTACTCTTCACTTGGT 154101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402329580386432
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |