Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 3e-14 >seq3 Length=2773601 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || | ||||| ||||||||||| | ||| || || Sbjct 154121 ATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATTACTCTTGAAGTTGAGTCCTCT 154180 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || ||| | || || |||||| ||||| ||||| | || || ||| Sbjct 154181 GATACTATTGATAATGTTAAGACCAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 154240 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| ||||||| ||| || || |||||||||||| | ||| || ||||||||| Sbjct 154241 CAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCTTGTCTGATTACAAC 154300 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || ||||| ||||| || || || || || Sbjct 154301 ATTCAAAAGGAATCCACTCTCCACTTGGT 154329 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 106246 ATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGG 106305 |||| | || | ||||||||| || || || || | ||||| |||||||| || | | Sbjct 153879 ATAACAACTTCACAATGCAAATCTTCGTAAAGACCCTCACTGGTAAGACCATCACTCTTG 153938 Query 106306 AAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCG 106365 | || || ||| || | | | | || || || ||| ||||| ||||| Sbjct 153939 AGGTTGAGTCCTCTGATACTATCGACAATGTCAAGACCAAGATTCAAGACAAGGAAGGTA 153998 Query 106366 TGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTA 106425 | || || |||||||| ||||||| ||| || || |||||||||||| | ||| Sbjct 153999 TTCCTCCAGACCAACAAAGACTTATTTTTGCTGGTAAGCAATTAGAAGATGGCAGAACCT 154058 Query 106426 TGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGT 106468 || |||||||| || ||||| |||||||| || || || || Sbjct 154059 TGTCTGATTACAATATTCAAAAGGAATCTACTCTTCACTTGGT 154101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329580386432