Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 2e-12
>seq3
Length=2773601
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| |||| | || || | || || || |||||||| || ||
Sbjct 154767 TCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAA 154708
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||| ||||| | ||||| | ||||||||| ||||| ||| | |
Sbjct 154707 ATCAAACGCTGTTGGTCTGGAGGAATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTA 154648
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || || ||||| || || | || || || ||||| |||||||| || ||
Sbjct 154647 TCAATAGTATCAGAGGATTCAACTTCGAGAGTAATAGTCTTACCAGTCAAAGTCTTGACG 154588
Query 35726 AATATCTGCAT 35736
|| || |||||
Sbjct 154587 AAGATTTGCAT 154577
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| | || || |||| || ||||||||||| |||||
Sbjct 155224 CTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCGAGCTGCTTACCGGCAAA 155165
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|| | | || ||||| | |||| || ||||||||| |||||| ||| | | |
Sbjct 155164 GATGAGTCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 155105
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | ||||| || || ||||| | |||||| || ||||| || | || || ||
Sbjct 155104 ATCAATGGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCTTACCAGTGAGGGTCTTGAC 155045
Query 35725 AAATATCTGCAT 35736
|| || |||||
Sbjct 155044 GAAGATTTGCAT 155033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450793577460320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |