Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=2773601
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110
|| || || |||||||| ||||||||| | | || | || ||||| || |||||
Sbjct 154773 GTGGATTCCTTTTGAATGTTGTAGTCGGAGAGAGTACGGCCATCCTCGAGTTGCTTACCA 154714
Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170
||| |||| | ||||||||| || || || | |||||| || || |||||| | ||
Sbjct 154713 GCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCCTCCTTGTCTTGAATCTTGGTCTTG 154654
Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230
| | | || | ||| || | || ||||||||| ||||| |||| || || |||| |||
Sbjct 154653 ACGTTATCAATAGTATCAGAGGATTCAACTTCGAGAGTAATAGTCTTACCAGTCAAAGTC 154594
Query 27231 TTCACAAAGATTTGCATA 27248
|| || ||||||||||||
Sbjct 154593 TTGACGAAGATTTGCATA 154576
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | ||||| || ||||| || || |||||| | | || |||||||
Sbjct 155013 ACCAAGTGGAGAGTAGATTCCTTTTGGATGTTATAGTCGGAGAGAGTACGGCCGTCTTCC 154954
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
| || ||||| ||| |||| | ||||||||| || || || | ||| || || ||
Sbjct 154953 AATTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 154894
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
||||| | || | | | || | ||| || | || || ||||| ||||| |||| ||
Sbjct 154893 ATCTTAGTCTTGACGTTGTCGATAGTATCAGAGGACTCGACTTCGAGAGTAATAGTCTTA 154834
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| |||| ||| || || ||||||||||||
Sbjct 154833 CCAGTCAAAGTCTTGACGAAGATTTGCATA 154804
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || || || ||||||||| | | || ||||||||
Sbjct 155241 ACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTTCG 155182
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| |||||||| | ||||| | ||||| || || || | ||||| || || |
Sbjct 155181 AGCTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 155122
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218
|||||| | || | | || | ||||| | | || || || || || |||| ||
Sbjct 155121 ATCTTGGTCTTGACATTATCAATGGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCTTA 155062
Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248
|| || || || || || ||||||||||||
Sbjct 155061 CCAGTGAGGGTCTTGACGAAGATTTGCATA 155032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934379284448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |