Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1 138 1e-27
seq2 118 1e-21
>seq1
Length=5930846
Score = 138 bits (152), Expect = 1e-27
Identities = 490/756 (65%), Gaps = 11/756 (1%)
Strand=Plus/Plus
Query 118716 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCAC 118775
|| ||||| |||||||||| |||||| | || | ||||| ||||| ||||||||
Sbjct 4966724 GATGCCAGGTTACACACAGCGGTCTCCTGTTTGGACGAGTACTGGATAATCTCCGTGCAT 4966783
Query 118776 AAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 118835
| || ||| ||||| || || | || ||||||||||| ||| ||||||| | |||
Sbjct 4966784 AGATTGGAAGATTTAATCGTACCAAGATTATTTTGATTTGATTTTCTGTTACAGGAATCT 4966843
Query 118836 TTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-C 118894
|||||||||||| |||| || || ||||| ||| | || | ||| || ||||| |
Sbjct 4966844 TTGTAAAGCATGAATGGAGTTCCAGTCTCGACTTGAGTCTCTAAAATGGCAAACCAGAGC 4966903
Query 118895 ATC-GGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGG 118953
|| || ||| | | | || || |||| || || || |||| | |
Sbjct 4966904 TTCTGGGCTCTGACCTTGCGAACATG--TCTGTTTTCTTTTTCATATCTTTTGTACAAAG 4966961
Query 118954 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAG 119013
||| || || ||||| | | || || | || || || | ||| || | || |
Sbjct 4966962 TTTCGAATTCATCACCGTAGACGTCAGATAAACCAGGAGCTTCATCAGGTGAAAATAAGC 4967021
Query 119014 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 119073
|||||| | ||| |||||||| | || |||||||| || || | |
Sbjct 4967022 ACCATTCTTGGTTGTTGCTTACCTTTTTCATGAACAAATCAGGGATCCAAAGAGCATAAA 4967081
Query 119074 AGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCA 119133
| | || ||| | |||||| | || ||||| || ||||| ||||| || |
Sbjct 4967082 ACAAGTCTCGAGCTCTTAATTCTTCTTTGCCGTGATTTTTTCGTAACTCTAAAAACTCTA 4967141
Query 119134 TGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCA 119189
||||| |||||| ||||||| ||| | || | | ||| ||| | ||||
Sbjct 4967142 ATATATCACTGTGCCAAGGTTCCAAGTAAATAGCAAAAGCACCTGGTCTTTTG-TTACCA 4967200
Query 119190 GCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCG 119249
|||| | ||||||||| ||||| |||||| || | ||||| || | || |||| |
Sbjct 4967201 CCCTGATCTACATACCTGGCAGTATTGTTAAAAACTCTTAGCATCGGCACAATTCCATTG 4967260
Query 119250 GATTGGCCATTTGTCCCCCGAATACGAG-ACTTATTGGCTCTGACATCGTGGATGTGCAT 119308
|| |||||| |||| ||| || || | | | | || || || ||||| |
Sbjct 4967261 GAGCTGCCATTACTCCCAGCAATGTAAGCACCCGTCGAC-CGGATATTATGAATGTGGAG 4967319
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
|||||| || ||||| |||||||| ||||| || | || | |||| || ||
Sbjct 4967320 ACCAATCCCACCTGCAGTTTTTGAGATCATAGCGCAGTCTTTTAGGGTATCGTAAATGCC 4967379
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGT 119428
|| || || || | || | || | | ||||||| ||| | |||||| | || ||
Sbjct 4967380 TTCTATGGAATCCTCTTTCATAGCTACCAAGAAGCAGGACGATAATTGAGGATTAGGCGT 4967439
Query 119429 ACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464
|||| |||||| || ||||||| ||| ||| ||||
Sbjct 4967440 GCCAGAGTTGAATAGTGTTGGTGACGCATGGGTGAA 4967475
Score = 107 bits (118), Expect = 2e-18
Identities = 296/454 (65%), Gaps = 0/454 (0%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
|||||||||| ||| | || || | ||| | |||||||| || || || | ||
Sbjct 4965777 TGAACTGAATAGGTGCAGAAGCTGCTTTCGTTCGTAAATAGTACATTCCTGTTTTTAACC 4965836
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
||| ||||||| |||| | |||||| | | || || ||| ||| |||||
Sbjct 4965837 CCTTCTTCCAGCCATAAAAATGCATACTCGTGAGTTTTCCTGCAGTAGGATTTTTCATGA 4965896
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
| | |||||||| || || ||||| || | || || || || || ||||| ||||| |
Sbjct 4965897 AAATATTCATACTCTGAGACTGATCAATATAACGGCCACGGTCAGCTGCCATGTCAATAA 4965956
Query 117985 CATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATAT 118044
| |||| | | |||||| ||||| | || | | || | || | || || |
Sbjct 4965957 TAACCTTTTGGCTCAATTCCCAGGCAGTCTTATATATATCTTTCAGCTCCTTGGGAATCT 4966016
Query 118045 CCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACC 118104
| ||| ||||| || || ||| || | | | || | || | | ||||| || ||
Sbjct 4966017 CGGGGATGTTTTGAATAGAGCCATCCTCGCTAATAATCATATTCCTGATATCATTATTCC 4966076
Query 118105 AGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCG 118164
| || | || | || |||| ||| || | || |||||||| || ||||| |
Sbjct 4966077 ACAGCCTAAGTTGCACAAGGTCCTTCACTAGGTACTCGTTGACAACTTGGAATTCACCAG 4966136
Query 118165 CGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCA 118224
|| || ||| ||||||||| | ||| ||| |||||||| ||||| ||| |
Sbjct 4966137 AAAGTACACGCCTCGCATAGATATTCGATGTGATTGGTTCAAAGCATTCATTAAAACCAA 4966196
Query 118225 AGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 118258
||||| | ||| || ||||||||||| |||||
Sbjct 4966197 GAATTTGCGATGTTGAAGCTGTGGGCATTGGTGC 4966230
>seq2
Length=4956242
Score = 118 bits (130), Expect = 1e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 130016 GCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 130075
||||| || ||| | || || ||||| ||||| | ||| || ||||| ||||||
Sbjct 3220016 GCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGTCAGACCA 3219957
Query 130076 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 130135
|||||||| || ||||||||||||||||| || |||||| ||||||||||||||
Sbjct 3219956 GGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAAGAAGATA 3219897
Query 130136 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA 130173
||||| || || || |||| |||||||||||||||
Sbjct 3219896 CCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAA 3219859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435169078240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |