Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq3 410 4e-109 seq1 215 2e-50 seq2 154 4e-32 >seq3 Length=2773601 Score = 410 bits (454), Expect = 4e-109 Identities = 979/1471 (67%), Gaps = 13/1471 (1%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTG--TTTGGCAAAATGATC 349256 ||| | || || ||||| |||||||| || || ||||| || ||| ||| |||| Sbjct 1434276 GCTGTTGGTATTGATTTGGGTACTACCTACTCCTGTGTAGCCCACTTTTCCAA--TGATA 1434333 Query 349257 GTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTA 349316 | || || || ||||| ||||| |||||||||||||| || || || | ||| || || | Sbjct 1434334 GAGTTGAGATCATTGCCAATGACCAAGGTAACAGAACTACTCCTTCTTTCGTCGCTTTCA 1434393 Query 349317 CCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAA 349376 |||| | |||||| | ||||||||| |||| || ||||||||||| || || | Sbjct 1434394 CCGATTCCGAGCGTTTAATTGGTGATGCTGCTAAGAATCAAGCTGCCATGAACCCTGCCA 1434453 Query 349377 ATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACA 349434 | || ||||| ||||||||||| | |||||||||| | |||| | | | || | Sbjct 1434454 ACACTGTTTTCGATGCTAAGCGTTTGATTGGTAGAAAGTACACTGATCCTGAGGTCCAAA 1434513 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 | ||| | || || || || || | || ||| | ||| | | | |||| || Sbjct 1434514 GT--GATATTAAGCACTTCCCCTTCAAGGTCGTTG-ACAAGGCTGGCAAGCCCCAA--AT 1434568 Query 349495 TGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGT 349554 | || || | || ||||| | || || ||||||||||| || || ||||| Sbjct 1434569 CCAAGTCGAGTTCAAGGGTGAGGAGAAGGTCTTCACTCCCGAAGAAATCTCTTCTATGGT 1434628 Query 349555 TTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGT 349614 | || |||||||| | |||||| | | || |||| || || | | ||||| Sbjct 1434629 CCTCACCAAGATGAAGGAGACTGCTGAGGGTTTCTTGGGTGGTACTGTTAGCAACGCTGT 1434688 Query 349615 TATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAG 349674 |||||||| || ||||| || || ||| | || ||| || || || |||||||| Sbjct 1434689 CATTACTGTCCCTGCCTACTTCAACGATTCTCAACGTCAAGCCACCAAGGATGCTGGTCT 1434748 Query 349675 CATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATA 349734 ||||| || | || ||||| | || || || || || ||||| || || ||||| || Sbjct 1434749 TATTGCTGGTCTTAACGTTCTCCGTATCATCAACGAGCCTACTGCCGCTGCTATTGCCTA 1434808 Query 349735 TGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || | || || | | ||| || || || | ||||| |||||||| |||||||| Sbjct 1434809 CGGTTTGGACAAGAAGTCTGATGCCGAGAAGAACGTCCTTATCTTTGATTTGGGTGGTGG 1434868 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||| ||||| || || | || |||| || || ||||| || || || || ||||| Sbjct 1434869 TACTTTCGATGTTTCTCTCTTGACCATTGAGGACGGTATTTTCGAGGTCAAGGCCACTGC 1434928 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 ||||||||| || | ||||| || ||||| ||| | ||||| || || || || Sbjct 1434929 TGGTGATACCCACTTGGGTGGTGAGGATTTCGATCACCGTCTTGTCAACCACTTCGTCGC 1434988 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 || || ||| | | || | ||| || || | ||||| | | || | Sbjct 1434989 CGAGTTCAAGAGAAAGAACAAGAAGGATCTTTCTACCAACCAAAGAGCTCTTAGACGTTT 1435048 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 ||||| || ||||| ||||| ||| | | || || ||| || | ||||| ||||| || Sbjct 1435049 GAGAACCGCCTGTGAGCGTGCCAAGAGAACTTTGTCTTCTTCTGCTCAAACTTCTATCGA 1435108 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 ||| || ||| | || || | ||||||| | ||||| || |||||| | || || Sbjct 1435109 AATCGACTCTTTGTACGAGGGTATTGATTTCTACACTTCTATCACCCGTGCTAGATTCGA 1435168 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || || ||| ||| | || ||| | || || || ||||| || || || | || Sbjct 1435169 GGAGTTGTGTCAAGATTTGTTCAGATCTACCATCGAGCCTGTTGAGAAGGTTCTCCGTGA 1435228 Query 350155 -TGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTA 350213 | ||| | || | | || | || | || | || | |||||||||||||| |||| Sbjct 1435229 CTCCAAGATTGACAAGTCTTCTG-TTAACGAGATTGTCCTTGTTGGTGGTTCTACCCGTA 1435287 Query 350214 TTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAA 350273 | || || |||||| || | | || || || || || || || || || ||||| | Sbjct 1435288 TCCCCAAGGTTCAAAAGCTTGTTTCCGACTTCTTCAACGGTAAGGAGCCCAACAGATCCA 1435347 Query 350274 TTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAA 350333 | || || ||||| || ||||| |||||||| |||||||| || ||||| | ||||| Sbjct 1435348 TCAACCCCGATGAGGCCGTTGCCTATGGTGCCGCTGTTCAAGCCGCTATTCTTTCTGGTG 1435407 Query 350334 ATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGAT 350393 | | ||| || | | | || | || | | ||||| |||| ||||| ||||| Sbjct 1435408 ACACTTCTTCCAAGACTCAAGACTTGTTGTTGTTGGATGTCGCTCCTCTTTCTCTTGGTA 1435467 Query 350394 TAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAA 350453 | || ||| |||||| || ||||| || || || ||||| ||| | ||||| | Sbjct 1435468 TCGAGACTGCTGGTGGTGTCATGACCAAGCTCATCCCCAGAAACTCTACCATTCCTACCA 1435527 Query 350454 AAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTAT 350513 | ||||| | | || || || | ||| || || || || | || |||||||| | Sbjct 1435528 AGAAGTCTGAGATCTTCTCCACCTATGCTGACAACCAACCCGGTGTCCTCATTCAAGTTT 1435587 Query 350514 TTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTG 350573 | || ||||| ||| | || || || || || ||||| | || || | || Sbjct 1435588 TCGAGGGTGAGCGTACCAAGACCAAGGACAACAACTTGCTTGGTAAGTTCGAGCTCACTG 1435647 Query 350574 AAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAA 350633 ||||| || ||| | || |||||||| || || ||| ||||||| ||||| | | Sbjct 1435648 GTATTCCTCCCGCTCCTCGTGGTGTTCCTCAAATCGAGGTCACTTTCGACATTGACGCCA 1435707 Query 350634 ATGGTATTTTAAATGTTACCGCAGTTGAAAA 350664 ||||||| || || || | || ||||| || Sbjct 1435708 ATGGTATCTTGAACGTCTCTGCTGTTGAGAA 1435738 Score = 181 bits (200), Expect = 3e-40 Identities = 181/235 (77%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | || ||||| || || |||||||| || | Sbjct 154355 TTTGCATACCACCACGAAGACGAAGAACCAAGTGGAGAGTGGATTCCTTTTGAATGTTGT 154296 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| || |||| |||||||| | ||| || |||||||| || || | ||| || | Sbjct 154295 AATCAGACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGT 154236 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || || |||||||| | || ||||||||||| | |||||| | Sbjct 154235 CTGGAGGAATACCTTCCTTGTCTTGAATTTTGGTCTTAACATTATCAATAGTATCAGAGG 154176 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||||| |||| ||||| || || || || ||||| || || ||||| Sbjct 154175 ACTCAACTTCAAGAGTAATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCAT 154121 Score = 174 bits (192), Expect = 5e-38 Identities = 180/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | ||||||||||| || ||||||||||| | Sbjct 154127 TTTGCATACCACCACGAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTTTGAATATTGT 154068 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 ||||||| || |||| |||||||| | ||| || |||||||| || || | ||| || | Sbjct 154067 AATCAGACAAGGTTCTGCCATCTTCTAATTGCTTACCAGCAAAAATAAGTCTTTGTTGGT 154008 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || || ||||| || | || ||||| || || | |||||| | Sbjct 154007 CTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACATTGTCGATAGTATCAGAGG 153948 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||| ||||| || | ||||| || || || || ||||| || || |||||| Sbjct 153947 ACTCAACCTCAAGAGTGATGGTCTTACCAGTGAGGGTCTTTACGAAGATTTGCATT 153892 Score = 172 bits (190), Expect = 2e-37 Identities = 368/547 (67%), Gaps = 2/547 (0%) Strand=Plus/Minus Query 183245 AATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGA 183304 ||| || ||||||||||| |||||||| ||||| || ||||| ||||| || || | Sbjct 1435397 AATAGCGGCTTGAACAGCGGCACCATAGGCAACGGCCTCATCGGGGTTGATGGATCTGTT 1435338 Query 183305 TAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGA 183364 || || || || || || || |||| | | ||||| || || || | || || Sbjct 1435337 GGGCTCCTTACCGTTGAAGAAGTCGGAAACAAGCTTTTGAACCTTGGGGATACGGGTAGA 1435278 Query 183365 ACCACCGACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAAC 183424 |||||| || | || | || | | | | || ||| | || || | ||| Sbjct 1435277 ACCACCAACAAGGACAATCTCGTTAACAGAAGACTTGTCAATCTTGGAGTCACGGAGAAC 1435218 Query 183425 TTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGC 183484 || |||||||| || || || ||| || |||||| ||| ||||| || ||||| || Sbjct 1435217 CTTCTCAACAGGCTCGATGGTAGATCTGAACAAATCTTGACACAACTCCTCGAATCTAGC 1435158 Query 183485 TCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGT 183544 | || | ||| | | || |||||||| | || || || || ||||| || || || Sbjct 1435157 ACGGGTGATAGAAGTGTAGAAATCAATACCCTCGTACAAAGAGTCGATTTCGATAGAAGT 1435098 Query 183545 TTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAA 183604 ||| | ||| || || || ||||| || || || ||||| || ||||| | || | | Sbjct 1435097 TTGAGCAGAAGAAGACAAAGTTCTCTTGGCACGCTCACAGGCGGTTCTCAAACGTCTAAG 1435038 Query 183605 TGATCTTGGATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATG 183664 | |||| | || | || ||| | || | ||||| || || || | | || || Sbjct 1435037 AGCTCTTTGGTTGGTAGAAAGATCCTTCTTGTTCTTTCTCTTGAACTCGGCGACGAAGTG 1434978 Query 183665 -TTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTT 183723 |||| | || ||| ||||| |||||||| || || ||||| |||||||| || | Sbjct 1434977 GTTGACAAGACGGTG-ATCGAAATCCTCACCACCCAAGTGGGTATCACCAGCAGTGGCCT 1434919 Query 183724 TAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCA 183783 | || || || || ||||| ||||| | || | || ||||| || ||||||||||||| Sbjct 1434918 TGACCTCGAAAATACCGTCCTCAATGGTCAAGAGAGAAACATCGAAAGTACCACCACCCA 1434859 Query 183784 AATCAAA 183790 ||||||| Sbjct 1434858 AATCAAA 1434852 Score = 158 bits (174), Expect = 4e-33 Identities = 176/235 (75%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | ||||| | ||||||||||| || |||||||| || | Sbjct 154583 TTTGCATACCACCACGGAGACGGAGAACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGT 154524 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || ||||| || ||||||||||| || | ||| || | Sbjct 154523 AGTCGGAAAGAGTACGACCATCCTCGAGTTGCTTACCAGCAAAGATAAGTCTTTGTTGGT 154464 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || || || || |||| || ||||||||||| | |||||| | Sbjct 154463 CTGGAGGAATACCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATAGTATCAGAGG 154404 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || | |||||||| || | || || ||||| || ||||| Sbjct 154403 ACTCGACTTCGAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 154349 Score = 136 bits (150), Expect = 1e-26 Identities = 171/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || ||||| || || |||||||| || | Sbjct 154811 TTTGCATACCACCACGGAGACGGAGGACTAAGTGGAGAGTGGATTCCTTTTGAATGTTGT 154752 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| || ||||| || ||||| || || | ||| || || | Sbjct 154751 AGTCGGAGAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGT 154692 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| || || || || ||||| || | || || |||||||| | |||||| | Sbjct 154691 CTGGAGGAATACCCTCCTTGTCTTGAATCTTGGTCTTGACGTTATCAATAGTATCAGAGG 154632 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||||| || |||| ||||| || || | || || || || || ||||| Sbjct 154631 ATTCAACTTCGAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 154577 Score = 127 bits (140), Expect = 6e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| |||||||||||| | | || || | || |||||||| || ||||| || |||| Sbjct 155039 TTTGCATACCACCACGAAGACGGAGGACCAAGTGGAGAGTAGATTCCTTTTGGATGTTAT 154980 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || ||||| | ||| || ||||| || || | ||| || || | Sbjct 154979 AGTCGGAGAGAGTACGGCCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGCTGTTGGT 154920 Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682 | |||||||| ||||| || || ||||| |||| || || || || || | |||||| | Sbjct 154919 CTGGAGGAATACCTTCCTTGTCTTGAATCTTAGTCTTGACGTTGTCGATAGTATCAGAGG 154860 Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || |||| ||||| || || | || || || || || ||||| Sbjct 154859 ACTCGACTTCGAGAGTAATAGTCTTACCAGTCAAAGTCTTGACGAAGATTTGCAT 154805 Score = 89.7 bits (98), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 140527 GAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTT 140586 || |||| || || || ||||| || || || || || || || | || || || |||| Sbjct 155242 GACCAAG-TGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTACGACCGTCTT 155184 Query 140587 CAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCT 140646 | || || || || |||||||| || | ||| || || || ||||| || || || || | Sbjct 155183 CGAGCTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTT 155124 Query 140647 GAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCT 140706 | || || | || ||||||||||| | || || | || || || || || | |||| Sbjct 155123 GGATCTTGGTCTTGACATTATCAATGGTGTCCGAAGACTCGACCTCGAGCGTGATAGTCT 155064 Query 140707 TTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | || || || || || || || || ||||| Sbjct 155063 TACCAGTGAGGGTCTTGACGAAGATTTGCAT 155033 >seq1 Length=5930846 Score = 215 bits (238), Expect = 2e-50 Identities = 467/693 (67%), Gaps = 8/693 (1%) Strand=Plus/Plus Query 349196 ACCGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGAT 349255 |||| || || || ||| | |||||||||||||| ||||||| |||| | |||||| Sbjct 2277970 ACCGTAATCGGTATTGATCTTGGTACTACTTATTCATGTGTTGGTGTTATGAAAAATGGA 2278029 Query 349256 CGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTT 349315 || || || | || |||||||||||| | | || || ||||| ||||||||| Sbjct 2278030 AAGGTTGAGATTTTGGCCAATGATCAAGGTCTTCGTATCACCCCCTCATATGTTGCATTT 2278089 Query 349316 ACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAA 349375 || || |||||| || | || ||| |||| || || || ||| ||||||| | Sbjct 2278090 ACTGATGAAGAGCGTTTGGTAGGAGATGCTGCTAAGAACCAGGCTTCTGCTAACACTGCT 2278149 Query 349376 AATACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAA 349435 ||||| |||| ||| ||||| | |||||| | | || || || || ||| Sbjct 2278150 AATACTATTTTCGATATCAAGCGTTTGATTGGTCTTAAGTACTCAGATCAAACTGTTCAA 2278209 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 ||| | || ||||| |||| || ||| | ||| | | | || ||| || | || Sbjct 2278210 AGAGATATTAAGCATTTCCCTTATAAGGTTAT--CAACA-AGGATGGTAAGCCTGCTGTT 2278266 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | || ||| ||||| | || |||| ||||||||| |||| | |||||| Sbjct 2278267 AAAGTCACTTATGGTGGTGAGGAGAAGACCTTTTCTCCCGAAGAAGTTTCCGCCATGGTT 2278326 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || | || |||||||| ||||| || | ||||| ||| | | || ||| |||||||| Sbjct 2278327 TTGGGCAAGATGAAGGAGATTGCCGAGGATTATTTGGGTAAGAAGGTTACTCATGCTGTT 2278386 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 ||||||| || || ||||| |||||||| || ||| || || || ||||| || | Sbjct 2278387 GTTACTGTGCCTGCTTATTTCAATGATGCTCAACGTCAAGCTACCAAGGATGCCGGTACT 2278446 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || || | | || | | || |||| || ||||||||||| || ||||| || Sbjct 2278447 ATTGCTGGTTTGACTATTTTGCGTATTGTTAACGAGCCCACTGCTGCTGCCATTGCCTAC 2278506 Query 349736 GGGCTTGA-TAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || | || | ||| || | || | || || ||| ||||| |||||||| Sbjct 2278507 GGTTTGGACCGTACTGA-TGGC---GAGCGTCAAATCATTGTTTACGATTTGGGTGGTGG 2278562 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 |||||||||||| || | | | |||| || |||| || || || ||||| Sbjct 2278563 TACTTTTGATGTTTCTTTGTTGTCGATTGAGTCTGGTGTTTTCGAGGTCTTGGCCACTGC 2278622 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || | ||||| || ||||| || Sbjct 2278623 TGGTGATACCCACTTGGGTGGTGAGGATTTCGA 2278655 Score = 163 bits (180), Expect = 9e-35 Identities = 459/700 (66%), Gaps = 21/700 (3%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| ||||| || || || ||||||||| | | || | Sbjct 2848645 GCTATCGGTATCGATTTGGGTACCACCTACTCGTGTGTTGCTACCTACGACTCTGCT--- 2848701 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || ||||| || || ||||||||| | || || || | |||||| || | Sbjct 2848702 GTCGAGATCATTGCCAACGAGCAAGGTAACCGTGTTACTCCTTCGTTCGTTGCTTTCTCT 2848761 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || | ||| | | ||||||||| | || || || ||||||||| ||| || || || Sbjct 2848762 GACAAGGAGAGACTTATTGGTGATGCCGCTAAGAACCAAGCTGCTCTTAACCCCAAGAAC 2848821 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || || || ||||| ||||| | ||||||||| ||||| ||| | ||| ||| Sbjct 2848822 ACTGTCTTCGATGCCAAGCGTTTGATTGGTAGACGTTTTGATGAGGACTCTGTTCAAAAG 2848881 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGT----TCCAAAAGACGGTGATAAACCAATTAT 349494 ||| | || || ||||| | ||| | || || |||| || || |||| Sbjct 2848882 GATATCAAGACTTGGCCTTTCAAGGTTATCGACTCTAA----CGGT---AACCCCTTTAT 2848934 Query 349495 TGAGGTTGAATA--TAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552 |||||| |||| | ||| || ||| | || | ||| |||| || || | ||| Sbjct 2848935 TGAGGTCCAATACCTCGAGGAGACCAAGACT--TTCTCTCCCCAAGAGATCTCCGCCATG 2848992 Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612 ||| | || |||||||| |||||||| || | | || | | || | || Sbjct 2848993 GTTCTTACCAAGATGAAGGAGATTGCTGAGGCCAAGATTGGCAAGAAGGTCGAGAAGGCC 2849052 Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672 ||| | ||||| || ||||| || || || | || | || || || || ||||| Sbjct 2849053 GTTGTCACTGTCCCTGCCTACTTCAACGACTCTCAAAGACAAGCTACCAAGGACGCTGGT 2849112 Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732 |||||| || | || ||||| | || ||||| || || |||||||| || ||||| Sbjct 2849113 GCCATTGCTGGTCTTAACGTTCTCCGTATCATTAACGAGCCTACTGCTGCTGCCATTGCC 2849172 Query 349733 TATGGGCTTGATAAA---ATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || |||| | | || || | || || | |||| ||||| ||| | ||| Sbjct 2849173 TACGGTCTTGGTGCTGGTAAGACCGAGGAGGAGAAGCACGTTCTCATTTTCGATCTTGGT 2849232 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || | | ||| || | || || || || Sbjct 2849233 GGTGGTACTTTCGATGTCTCCCTTCTTCAAATCCAAGGTGGTGTCTTCACTGTCAAGGCT 2849292 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 ||||| |||||||| || | ||||| ||||||| |||| Sbjct 2849293 ACTGCCGGTGATACCCACTTGGGTGGTCAAGATTTCGATA 2849332 Score = 111 bits (122), Expect = 5e-19 Identities = 304/466 (65%), Gaps = 6/466 (1%) Strand=Plus/Plus Query 350175 AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTAC 350234 ||||||| || | ||| | |||||||| ||||| ||||| || || ||||| | | | Sbjct 2278943 AGATTGACGATATTGTTCTTGTTGGTGGATCTACTCGTATCCCCAAGATTCAATCGATGC 2279002 Query 350235 TATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTG 350294 | || || || ||||| || | ||||||| |||||| | || || ||||||| Sbjct 2279003 TTGAGGACTTCTTCAATGGTAAGAAGCCTTCTAAGGGTATTAATGCTGACGAGGCTGTTG 2279062 Query 350295 CATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATG 350354 | ||||||||||||||||| || | |||| ||||| | || || |||||| Sbjct 2279063 CCTATGGTGCTGCTGTTCAAGCCGGTGTTTTGTCTGGTGAGGAGGGT------GTTGATG 2279116 Query 350355 ATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAA 350414 | | | || || ||||| | || | | ||||| | || || || |||| || | Sbjct 2279117 ACATTGTCCTGCTCGATGTTAACCCCTTGACTCTTGGTATTGAGACATCAGGTGGTGTCA 2279176 Query 350415 TGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTA 350474 |||| || ||| | || | | || | || || ||||| |||| ||||| | Sbjct 2279177 TGACCAAGCTCATTAACCGTAACACTCCTATCCCCACTCGTAAGTCGCAAATCTTTTCGA 2279236 Query 350475 CATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCA 350534 | | || || || || | || |||||||| ||||| ||||||||| ||| Sbjct 2279237 CTGCCGTTGACAACCAACCCACTGTTCTTATTCAAGTGTTTGAGGGTGAACGTACTCTTT 2279296 Query 350535 CTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAG 350594 |||| || ||||| ||||| | || || | || ||||| || || | | Sbjct 2279297 CTAAGGACAATAACCGTCTTGGTAAGTTCGAGCTCACTGGTATTCCTCCTGCTCCCCGTG 2279356 Query 350595 GAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTAT 350640 | |||||||| ||||| ||| | || || | ||| | ||||| || Sbjct 2279357 GTGTTCCTCAAATTGAGGTCACCTTTGAGCTCGATGCCAATGGAAT 2279402 Score = 93.3 bits (102), Expect = 1e-13 Identities = 191/279 (68%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 312181 ATTTCCTTTATAATCACTAGGTAATTCACTTATTTGTGTATTATAAAATGATTCAATATC 312240 ||||| || ||| ||| |||| | ||| ||||||||| |||| | ||| || || Sbjct 4881097 ATTTCATTAATATTCA-TAGGCATCTCATCAATTTGTGTACTATAGTACTGTTCGATGTC 4881155 Query 312241 TTTGAGATGTCTAATATC-TCTTCTAGTGACAAAATTTATAGAAACACCTTTTCTTCCCC 312299 | |||| | || || || || || || ||||| || | ||||| ||||| || Sbjct 4881156 ATGGAGAATTTGAACTTCATCGTCG-GTAACGAAATTAATTGCGACACCCTTTCTGCCAA 4881214 Query 312300 ATCTGCCACTTCTTCCAATTCTATGTAGATATGTATTAATACATTTTGGTATATCAAAAT 312359 |||| || || |||||||||||| | ||| | | | || || |||| ||| ||| Sbjct 4881215 ATCTTCCGGATCGTCCAATTCTATGGATATAGTTTTCACGACTATTGGGTAAGTCATAAT 4881274 Query 312360 TAATAACTGTACTTACTTGTTGAATATCAATGCCTCTCGCAGTTACATTTGATGATATTA 312419 | |||||| | |||||||| | ||||| ||||| || |||| | ||| || | Sbjct 4881275 TGATAACTAGAGACACTTGTTGGACGTCAATACCTCTAGCCCAAACATCAGTTGAGATCA 4881334 Query 312420 ATACCCGCATATTTCCTACTCTAAAATCTT-CATAATTT 312457 |||| || ||||||| || ||| |||| |||||||| Sbjct 4881335 ATACTCGAGAATTTCCTTGTCGAAATTCTTGCATAATTT 4881373 Score = 93.3 bits (102), Expect = 1e-13 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 313114 ATCAATAACCTCTAAACTAGATATAGTAAAACATGCTGTTTTACCTGTTCCTGATTGTGC 313173 ||| || |||||||| |||| || | |||| ||| ||||||||||||||||||||||| Sbjct 4882183 ATCGATCACCTCTAACATAGAGATTGAAAAAGTTGCAGTTTTACCTGTTCCTGATTGTGC 4882242 Query 313174 TTGGGCTATAATATCTTTTCCTTCTAAAATAGGGCAAATTGATTTTCTCTGAATTGGGCT 313233 || || ||| |||| |||| | ||| | | || | | || ||||||| || Sbjct 4882243 CTGTGCAATAGTATCCCTTCCACTGATAATTTGTGATATGGCTCGACTTTGAATTGCACT 4882302 Query 313234 AGGTTTTTCAAATCCATATGCATAAATACCTCTTAATAA 313272 || |||||| |||||||| || |||||| | ||||| Sbjct 4882303 CGGAGCTTCAAACCCATATGCGTAGATACCTTTCAATAA 4882341 Score = 87.8 bits (96), Expect = 5e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 205114 TCTGATAATCCAGGTGTTCTATCTGGACAAAATAATGACCATTTGCTATTAGTATGTACT 205173 || ||||| ||||| | | ||| || ||||||| |||||| || | ||| Sbjct 4966985 TCAGATAAACCAGGAGCTTCATCAGGTGAAAATAAGCACCATTCTTGGTTGTTGCTTACC 4967044 Query 205174 CTTTCCATAAACAGATCTGAAATCCAAAGAGCATAAAAAAGGTCACGAGCGCGAAGTTCT 205233 ||| ||| |||| ||| | ||||||||||||||||| | ||| ||||| | | |||| Sbjct 4967045 TTTTTCATGAACAAATCAGGGATCCAAAGAGCATAAAACAAGTCTCGAGCTCTTAATTCT 4967104 Query 205234 TCGTCTCCATGATTTTTCTTTAAATCTAAAAATTCTTCAATATCCGGATGATGTGGTTCA 205293 || | || |||||||| ||| |||||||| ||| ||||| || ||||| Sbjct 4967105 TCTTTGCCGTGATTTTTTCGTAACTCTAAAAACTCTAATATATCACTGTGCCAAGGTTCC 4967164 Query 205294 ATATACATAGCAAAACTTCCAGCTCTTTTTCCACCACC 205331 | || ||||||||| || | |||||| |||||| Sbjct 4967165 AAGTAAATAGCAAAAGCACCTGGTCTTTTGTTACCACC 4967202 Score = 86.0 bits (94), Expect = 2e-11 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 16482 AATAAATCTAGGAATTACTTTTTCAGGATACTGATTTGGTCCATATACATTATTTCCTCG 16541 ||| ||| | ||||||| |||||| ||| | |||| ||||||||||||||| || | ||| Sbjct 3028750 AATGAATTTGGGAATTATTTTTTCTGGAAATTGATGTGGTCCATATACATTGTTGCATCG 3028691 Query 16542 TGTTATAATAAATGGCATATTAAATGAATGGTTATATGAGTTGACTAACATTTCAGCAGC 16601 | | | | | || | |||||| || | | ||||| | ||||| | ||| | | Sbjct 3028690 TATCGTCACAGCAGGAAGATTAAACGACTTGACATATGCACTCACTAATAAATCACCCGA 3028631 Query 16602 AGCTTTTGATGCTGCATAAGGATTTGTTGG 16631 || ||||| |||||||| |||||||| || Sbjct 3028630 TGCCTTTGAAGCTGCATACGGATTTGTGGG 3028601 >seq2 Length=4956242 Score = 154 bits (170), Expect = 4e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || ||||| || ||||||||||| ||||| || || || ||||| Sbjct 2345899 ACCACCACGGAGACGGAGGACAAGGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCAGA 2345958 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| |||||||| || ||||||||||| | |||||| ||||| || || Sbjct 2345959 AAGGGTACGACCATCCTCAAGTTGCTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGG 2346018 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 |||||| || || || || || || | || ||||| || || | || || | ||||| Sbjct 2346019 AATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATAGTGTCGGAAGACTCAAC 2346078 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| ||||| || || || || ||||| ||||| Sbjct 2346079 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACGAAAATTTGCAT 2346126 Score = 129 bits (142), Expect = 2e-24 Identities = 228/329 (69%), Gaps = 4/329 (1%) Strand=Plus/Plus Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179 ||||| ||||| || ||||| |||||||| || | | | | ||||| ||| Sbjct 3753293 ATCAAGGCCATCTTCACCATAAATGAATTGAATAACGTCACCCAAAGAGTTTCGAGTAGT 3753352 Query 378180 CATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACC 378239 ||||||| |||||| | ||| ||||| || |||| || || || ||||||||| Sbjct 3753353 TCCATCATATTGAACCATGATATCCTCTAAGGCCTTAACTAGACGACGCTGAATATAACC 3753412 Query 378240 AGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAA 378299 ||||| | ||| || || ||||| || || | ||| |||||||| |||| || ||||| Sbjct 3753413 AGTTTCAGCAGTCTTGACAGCAGTGTCGATAAGACCCTCACGACCAGCCATGGCGTGGAA 3753472 Query 378300 GAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCC 378359 || || || ||||| | ||| | || | | ||| | || | |||||| ||| || | Sbjct 3753473 AAAGAACTCCTGTGGAGTTAATCCTCTAAGATAAGAATTTTCCACAAATCC-CTT-CGAC 3753530 Query 378360 T--GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGA 378417 | || |||| ||||| ||| || | ||||| || | |||| |||| ||| | || Sbjct 3753531 TCAGGAGAATAATCATCTTTCGTGAAGTGAGGCAAACTTCGATCGGCAAAACCAAAAGGT 3753590 Query 378418 ATTCGTTTTCCATCAACATTCTGTTGACC 378446 || || || || || ||| ||||||| || Sbjct 3753591 ATACGCTTACCCTCGACAATCTGTTGGCC 3753619 Score = 98.7 bits (108), Expect = 3e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 377496 ACCAGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGC 377555 ||||||||||||||| || ||||| || | |||||||| ||||||||||| ||||| | Sbjct 1680328 ACCAGCAAAGTGGAAGGTGTTAAGGGTCATTTGAGTAGAAGGCTCACCAATAGACTGAGA 1680387 Query 377556 TGCAATAACGCCAACCATTTCTCCAGGATTGACAATAGCCTCTTTATAC 377604 |||||||| || ||| ||| ||||| ||||||| || || ||||| Sbjct 1680388 TGCAATAATACCCACCGCTTCACCAGGGTTGACAACAGACTGCATATAC 1680436 Score = 98.7 bits (108), Expect = 3e-15 Identities = 197/292 (67%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 206444 CACACTGGTCAATATATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCAT 206503 ||| ||| |||| ||||| ||| || ||||| || || | | ||| |||| |||||| | Sbjct 3633037 CACCCTGATCAACATATCTAGCAGTATTATTGAAAACTCTCAACATGGGAACAATACCGT 3632978 Query 206504 TAGAAGTTCCATTTGTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTA 206563 | || || || || ||||| ||| | |||||| | | |||||||| | | | Sbjct 3632977 TTGAGGTACCGTTAGTTCCAGCAATGTAGGAGCCAGTAGCACGGATATTATGAACACTCA 3632918 Query 206564 ATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTC 206623 | ||||| || || || | |||||||| ||||| || || |||| ||||| | Sbjct 3632917 AACCAATACCACCAGCAGACTTTGAAATCAAGGCACAAGTCTTCAAAGTATCGTAAATGC 3632858 Query 206624 CATCAACACTATCACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCG 206683 |||| | | ||| | ||| || || || ||||| | ||| || || | Sbjct 3632857 CATCTATAGAATCGTCCTTCATGTTAACCAAGAAGCAAGAGGACATTTGAGGCTTGGGAG 3632798 Query 206684 TTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACAT 206735 | |||||||| | | ||| || | |||||||||||||| ||||||||||| Sbjct 3632797 TACCAGCATTGTACAGAGTGGGGGAGGCATGTGTAAAATACTTTTGAGACAT 3632746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515254322343212