Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 464 9e-126 >seq2 Length=4956242 Score = 464 bits (514), Expect = 9e-126 Identities = 1404/2138 (66%), Gaps = 63/2138 (3%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||| ||||| |||| ||||| | || |||||| | |||||||| || || || ||| Sbjct 3634430 GTAAATTGAATAGGAGCGGATGCTGCTTGTGTACGCAAGTAGTACATTCCTGTCTTAAGA 3634371 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||| ||| |||||||||||||| || |||| |||| | ||||| | || Sbjct 3634370 CCCTTTTGCCAGCCGTAGAAATGCATACTAGTCAATTTGCCCATAGTAGGAGCTTGAATG 3634311 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 | ||| |||| || |||||||||||||| || || | | |||||| ||||| | || Sbjct 3634310 TAAATGTTCAAAGATTGACTTTGATCGATAAAGGCAGCACGATCAGCAGCCATATCAATG 3634251 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || ||||| |||| || ||||||| ||| || | | | |||||||| || || | | Sbjct 3634250 ATTGTCTTCTGAGAAAGCTCCCAAACAGTCTTATACAATGCCTTGATATCCTCAGGGATG 3634191 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | |||| ||||| |||||| | | |||||| ||||||| || | || | Sbjct 3634190 TTAGGAATATTCTGAATAGAACCATTGTTGGCAATAATTCTATTCTTCATGTTCTCTCCC 3634131 Query 77079 CACAATTTCCTCTCTGTTAAAACTCT--AAGGAG-ATGAGGATTAACTATTTGAAATTCT 77135 |||| | | || | || || || | || ||||||| ||||| ||||| Sbjct 3634130 CACAGTCCCAAATC-GACAAGGTCCTTCAACAACCATT--GATTAACAATTTGGAATTCA 3634074 Query 77136 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTT 77195 || | | |||||||||| ||| || || || || ||||| | | |||| ||||| Sbjct 3634073 CCGGCAAGAACTCTACGAGAGTAGATGTTGGATGTGTAAGGTTCGAAACATTCGTTGTTA 3634014 Query 77196 CCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGA 77255 || | |||||| | || || ||||| |||||||| || || | | ||||| ||| Sbjct 3634013 CCAAGAATTTGTGATGTTGAGGCAGTAGGCATAGGAGCAACGAGAAGGGAGTTTCTCAGA 3633954 Query 77256 CCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACA 77315 ||||| | || || | || ||| ||| ||||| ||||| | || | | Sbjct 3633953 CCATGCTTAGCCATCTTCTTCTTGAGAGCAGCCCAGTCCCAGAGATCAGTGGGAGTGATA 3633894 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 ||||| | ||| |||| | || || || ||| || || | || || ||||| Sbjct 3633893 TCCCACAAATCAAATTGCAAAAGACCCTTTGAGGCAGGAGAACCTTGGTAAGTCTCATAG 3633834 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 ||||| | ||| || |||||| | ||| | || | | ||| || || || Sbjct 3633833 GGTCCGTACAATTCGGCGAGTTCAACCGAAGATTCAACAGCAGCATGATAGATGGTCTCA 3633774 Query 77436 AAAATCTTCTTATTGAGAT-CTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAAT 77494 ||| | || | | |||| || ||| || || || || | | | || Sbjct 3633773 GCAATTTGAACGTTCAATTGCTTG-GCCTCAGGGGAGTCGAATGGCAAACGGAGAGCCAT 3633715 Query 77495 AAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 77554 ||||||||| || || || |||| |||| | |||| ||||| || | |||| | Sbjct 3633714 AAAGGCATCGGCCAAACCTTGAATACCAAGAGCAATGGGTCTGTGACGGAAATTGCTTCT 3633655 Query 77555 TTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAAC 77614 || |||||| | ||| ||| | || |||| ||||| ||| | |||||| || Sbjct 3633654 TTCAGCTTCCTTGACAGGGTAAAAGTTTCTGTCAATAATAACATTCAAGTTTCTAGTGAC 3633595 Query 77615 TACTTTAACCACGTCCTTTAGTTTAAGAAAAT-------CAAATCTTCC--ATCTAT--- 77662 || || | || || | ||||| ||| | |||| ||||| ||| | Sbjct 3633594 AACCTTGGCAACCTCGTGAAGTTTGTTAAAGTTATACCACAAACCTTCCTCATCACTTTC 3633535 Query 77663 AACAAA--CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTG 77720 ||| || || || | || | ||||| | |||||| || || || || | || Sbjct 3633534 AACGAAAGCAGGT--AGAGACAACGATGCCAAATTACAGACGGCAACTTCTTCAGGAGAA 3633477 Query 77721 GCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGG 77780 | || | | || || || | || | |||||||| |||| ||||||||| Sbjct 3633476 GAGTACTCAACAATTTCACAGCACAAGTTGGAGGACTTGATAGTACCCAAGTTTTGTTGG 3633417 Query 77781 TTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGT 77840 || ||||| |||| || | ||||||||||| || || || | || || ||| | || Sbjct 3633416 TTACTCTTGCTATTACAAGCATCCTTATAAAGCATGAATGGGTTACCAGTCTCAGTTTGA 3633357 Query 77841 GATTCGATAATAGATTTCCAGACGACTCTAGCTTTTAT-CATAGAT--TTGTATCGCCTC 77897 | ||||| ||||| || || || ||||||| | | ||| || | ||||| Sbjct 3633356 GCTTCGAGAATAG-----CATACCAC---AGCTTTTGGGCCTTGATGGTTCTTCTGCCTC 3633305 Query 77898 TCTCTTTCATATTG-AGT----ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 | ||| | | | | | | ||| || | || || || || | |||||||||| Sbjct 3633304 TACCTTCCTTCTCGTACTTCTCATAAAGAGCAACGAACTCGTCACCATAGACATCATCCA 3633245 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 | ||||| || ||||| || |||||||| | ||| || | | |||| |||| |||| Sbjct 3633244 AGCCAGGACACTCATTGGGACACATCAAAGTCCAATCCTCGTTAGCCTTGACTCTCTTCA 3633185 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | || | ||||| ||||||||||| | || | ||||| || | |||||| || | Sbjct 3633184 TGAACAAGTCAGGAATCCATAGAGCCAAGAACAAATCTCTGGCACGGACTTCTTCCTTAC 3633125 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | ||||||| || || | || || | || |||| |||||| || || | || | Sbjct 3633124 CGTGATTCTTTCGCAGCTCAATGAATTCAAAAACATCATCATGCCAAGGCTCCAAGTACA 3633065 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | | | || ||||| |||||||| |||||||| | |||||| || || ||||| Sbjct 3633064 TGGCAAAAGCACCTGGTCGCTTATTACCACCCTGATCAACATATCTAGCAGTATTATTGA 3633005 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 ||||||||||||| |||| ||||||||| || || || || ||||||| ||| || | Sbjct 3633004 AAACTCTCAACATGGGAACAATACCGTTTGAGGTACCGTTAGTTCCAGCAATGTAGGAGC 3632945 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 || | || || |||||| || | || || || || || ||| || || | | Sbjct 3632944 CAGTAGCACGGATATTATGAACACTCAAACCAATACCACCAGCAGACTTTGAAATCAAGG 3632885 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAA-GAAGA 78371 | ||| ||||| |||||||| || || |||||| || ||| ||||||||| |||| Sbjct 3632884 CACAAGTCTTCAAAGTATCGTAAATGCCATCTATAGAATCGTCCTTCATGTTAACCAAGA 3632825 Query 78372 A--AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCAT 78429 | || || ||||||||| | | ||| || ||||| | | || || || |||| Sbjct 3632824 AGCAAGAG---GACATTTGAGGCTTGGGAGTACCAGCATTGTACAGAGTGGGGGAGGCAT 3632768 Query 78430 GCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAATAGC--TGATTCTATGTCCC 78486 | ||||| | |||| ||| | |||| |||||||||||||| || || | || || Sbjct 3632767 GTGTAAAATACTTTTGAGACATGTAG-TTGTATGTTTCAATGGCCTTGGT--GATATCAG 3632711 Query 78487 ATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTAT 78546 | |||||| || || ||||| | ||| | ||| || || ||||| || | | ||| Sbjct 3632710 AACCATGAATACCAACAGCTACTCTCATGATCATGTGTTGGGGTCTCTCGGCGATTTTAC 3632651 Query 78547 TATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 78606 ||| || || | |||||| ||| |||||||||| || ||||| || || ||||| || | Sbjct 3632650 CATTAATCTTGAGCAAGTACGATCTTTCCAAAGTCTTGAAACCGAAGTAATTGTAAGAGA 3632591 Query 78607 AGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC--TTTGTATTTGGTAACAATATC 78664 | || | || |||| ||| | ||||| || | ||| || |||| ||||| | Sbjct 3632590 AATCACGATCATAAACAATGGCTGAATTAAGCTCATCAGCATGCTTTTG--AACAACCT- 3632534 Query 78665 CATGACA-GT-AGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTA 78722 ||| ||| || | | ||| || || || | |||||| |||||| ||||| Sbjct 3632533 CAT-ACACGTCATCAGCAATCATGGGCGAAAGCTTACCATTGCGAGGATTGGTATAGTGG 3632475 Query 78723 AATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACA 78782 ||||||| | || || | | ||| | || || |||| || || | ||||| ||| Sbjct 3632474 TATAAATCGTAGATGACCTGAGAGAATTGCTTCTTGGTTTGTTTATGCAAGTTAGAAACA 3632415 Query 78783 GCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTATT 78842 || ||||| ||||| ||||| |||||||| || ||||| || || | ||| || | Sbjct 3632414 GCGATTCTAGCAGCAAGAATTGCATAATCTGGGTGTTGAGTGGTCATATAGGCAGCGGTC 3632355 Query 78843 TCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCC 78880 || || || ||| | || || || | ||| ||||| || Sbjct 3632354 TCAGCAGCCAAATTGTCCAATTCAACAGTCGTGACTCC 3632317 Score = 197 bits (218), Expect = 2e-45 Identities = 420/622 (68%), Gaps = 10/622 (2%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 ||||| |||||||| || | |||||||| | || |||||||| || || || Sbjct 3220022 AAACAAGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGTTTGAGAACGTC 3219963 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||| ||||| |||||||| || || | ||| || || || || |||||||| ||| Sbjct 3219962 AGACCAGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATGATCCAGAGAAG 3219903 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG-CT--TCGTTG 48314 || || || || ||||| ||||| || || | ||| | || ||| || || | Sbjct 3219902 AAGATACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGGACTGATCATCA 3219843 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 48374 ||||| || | ||||| |||||||||||||| | ||| || || | || |||||| Sbjct 3219842 GCAATCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATATTGTCAATAGCA 3219783 Query 48375 TTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTA--AAAGACTAT 48432 | || | |||||| || || ||| || | ||||| || || | || || || Sbjct 3219782 TGGAACAAAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATAAGTAATGAGTAG 3219723 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 | || | || || || || || || || || ||||||||||| | || || | Sbjct 3219722 G--TCTCTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACACTTTGCCTCGG 3219665 Query 48493 TGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAG 48552 || || || || | | |||| |||| |||| ||||| || || || ||||| || Sbjct 3219664 GAATTTGAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATACCATCTGAAG 3219605 Query 48553 CAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCA---GTTTAT 48609 ||||||| ||||| | ||| | |||||| || | || | | | | | | | Sbjct 3219604 CAGCAAAGAATGCAAGGACACGAGAGATAAAAAATCTCTCATCATCATTAAGACGGTGCT 3219545 Query 48610 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTG 48669 ||||||| |||| || ||| || ||| | ||||||||| ||||| || || ||||| | Sbjct 3219544 CCCAGTCACTGATGTCCTTTCCTAAATCAATTTCTTCAGCAGTCCAGAAAGAAGCCTCAG 3219485 Query 48670 CTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCTATTTG 48729 | | || ||||| | ||| || ||| ||| | || ||||| | ||||||||| || | Sbjct 3219484 CCTGCTTGTACATTTGCCAAATCTCATGGTACTTAATAGGGAACAGAACAAATCTGTTAG 3219425 Query 48730 GATTTTTTGCAAGGATAGGTTC 48751 | |||| | ||||| |||||| Sbjct 3219424 GGTTTTCTTGAAGGAGAGGTTC 3219403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668765266560