Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016- 05-06] 4 sequences; 15,938,258 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq2 197 1e-45 >seq2 Length=4956242 Score = 197 bits (218), Expect = 1e-45 Identities = 581/877 (66%), Gaps = 25/877 (3%) Strand=Plus/Minus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263 ||| ||||| |||||||| || || | |||| || || || || ||||| || Sbjct 3220323 CATGACACCTGCCTTTTGATAGTCAGACACTC-TCTTCTCAAAGAAGTTGGTCTTGCCAG 3220265 Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAG--CT-TTAC 23320 ||||| || |||||||| |||||||| || || | || ||||||||| || |||| Sbjct 3220264 ACAATGAGATGTTTTCCATGAAATCAAAGGGGTTGGTAGCATTATATACCTTACTGTTAC 3220205 Query 23321 -ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379 | | || ||| | || || || ||||| ||||| ||||| ||||| || | Sbjct 3220204 CAAGGGAAAG----TAATAATCTGTCAGCAACAAACTCAATGTATTGGCACAT--AAGCT 3220151 Query 23380 TAG--TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGG 23437 | | || || || | || | ||| | |||||| ||||| |||||||| Sbjct 3220150 TGGCATTCATTCCCAAAAGACTACATGGCAAAGCATCAGTCAAGAACTCCTTTTCAATAA 3220091 Query 23438 AAACAGCATCTTTAATTATTTGAACAATAACTT-CTTCACTAGGTGGATATTTTAAA--T 23494 ||| || || | || || | ||||||| |||| ||||| | || || | Sbjct 3220090 TAACGGCTTCAGTGATAATCTTTTCAATAACAGACTTCT-TAGGTC--TGTTGACAAGGT 3220034 Query 23495 ACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCAT 23554 || | ||||| |||||||| || | ||||||||| | |||||||| | Sbjct 3220033 GGCCGAAAAGCAAACAAGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGT 3219974 Query 23555 TAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATG 23614 | || || || | || ||||| | ||| || || || | ||| || || ||||||| Sbjct 3219973 TTGAGAACGTCAGACCAGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATG 3219914 Query 23615 ATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTG 23674 |||| || ||||| ||||||||||| || |||||||| || ||||| | |||| || | Sbjct 3219913 ATCCAGAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGG 3219854 Query 23675 CATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTG 23734 | || ||||| ||||||| | ||| | ||||||| || | ||| ||| Sbjct 3219853 ACTGATCATCAGCAATCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATAT 3219794 Query 23735 TTTCAATTGCTTTTAAGAGAAAAGTT-TTTTCTTCATTATCTGTTATATATGTATCAATT 23793 | ||||| || | || | ||||||| || | | ||| | ||||| || ||||| Sbjct 3219793 TGTCAATAGCATGGAACA-AAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATA 3219735 Query 23794 AGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACAT 23853 ||||| || | || | ||| || || || || ||| || || || |||||||| Sbjct 3219734 AGTAATGAGTAGGTCTCTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACAC 3219675 Query 23854 CTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913 | || || | | |||||| ||| | | ||||||| | | || || ||||| || ||| Sbjct 3219674 TTTGCCTCGGGAATTTGAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATA 3219615 Query 23914 CCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTTG 23971 ||||| |||||||||||| ||||| ||| |||||| ||| |||||| || Sbjct 3219614 CCATCTGAAGCAGCAAAGAATGCAAGGACACGAGAGATAAAAAATCTCTCATCATCATTA 3219555 Query 23972 ATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 | | | | ||| ||| | || || ||| |||||||| ||| ||| | ||||| ||| Sbjct 3219554 AGACGGTGCTCCCAGTCACTGATGTCCTTTCCTAAATCAATTTCTTCAGCAGTCCAGAAA 3219495 Query 24031 CTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067 ||| || |||| |||||| ||||||| |||| Sbjct 3219494 GAAGCCTCAGCCTGCTTGTACATTTGCCAAATCTCAT 3219458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487973925600