Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20lignohabitans_20[refseq_20GCF_5F001640025.1_202016-
05-06] 4 sequences; 15,938,258 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq2 197 1e-45
>seq2
Length=4956242
Score = 197 bits (218), Expect = 1e-45
Identities = 581/877 (66%), Gaps = 25/877 (3%)
Strand=Plus/Minus
Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTT-TCGAAAAAATTTGTCTTACCCT 23263
||| ||||| |||||||| || || | |||| || || || || ||||| ||
Sbjct 3220323 CATGACACCTGCCTTTTGATAGTCAGACACTC-TCTTCTCAAAGAAGTTGGTCTTGCCAG 3220265
Query 23264 CTAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAG--CT-TTAC 23320
||||| || |||||||| |||||||| || || | || ||||||||| || ||||
Sbjct 3220264 ACAATGAGATGTTTTCCATGAAATCAAAGGGGTTGGTAGCATTATATACCTTACTGTTAC 3220205
Query 23321 -ATGATAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCA 23379
| | || ||| | || || || ||||| ||||| ||||| ||||| || |
Sbjct 3220204 CAAGGGAAAG----TAATAATCTGTCAGCAACAAACTCAATGTATTGGCACAT--AAGCT 3220151
Query 23380 TAG--TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGG 23437
| | || || || | || | ||| | |||||| ||||| ||||||||
Sbjct 3220150 TGGCATTCATTCCCAAAAGACTACATGGCAAAGCATCAGTCAAGAACTCCTTTTCAATAA 3220091
Query 23438 AAACAGCATCTTTAATTATTTGAACAATAACTT-CTTCACTAGGTGGATATTTTAAA--T 23494
||| || || | || || | ||||||| |||| ||||| | || || |
Sbjct 3220090 TAACGGCTTCAGTGATAATCTTTTCAATAACAGACTTCT-TAGGTC--TGTTGACAAGGT 3220034
Query 23495 ACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCAT 23554
|| | ||||| |||||||| || | ||||||||| | |||||||| |
Sbjct 3220033 GGCCGAAAAGCAAACAAGCAAAATCGGTGTGCATGCCTTCATCACGCGAGATCAATTCGT 3219974
Query 23555 TAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATG 23614
| || || || | || ||||| | ||| || || || | ||| || || |||||||
Sbjct 3219973 TTGAGAACGTCAGACCAGGCATGAGTCCACGCTTCTTCAACCAGAAGATACTGGCAAATG 3219914
Query 23615 ATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTG 23674
|||| || ||||| ||||||||||| || |||||||| || ||||| | |||| || |
Sbjct 3219913 ATCCAGAGAAGAAGATACCCTCAACGGCAGCAAAGGCAACGAGACGCTCAGCAAAAGTGG 3219854
Query 23675 CATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTG 23734
| || ||||| ||||||| | ||| | ||||||| || | ||| |||
Sbjct 3219853 ACTGATCATCAGCAATCCATCGGAGAGCCCAGTCAGCCTTCTTCTTAATACATGGAATAT 3219794
Query 23735 TTTCAATTGCTTTTAAGAGAAAAGTT-TTTTCTTCATTATCTGTTATATATGTATCAATT 23793
| ||||| || | || | ||||||| || | | ||| | ||||| || |||||
Sbjct 3219793 TGTCAATAGCATGGAACA-AAAAGTTAGCCTCCTTAGCATCCTTGATATAAGTGTCAATA 3219735
Query 23794 AGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACAT 23853
||||| || | || | ||| || || || || ||| || || || ||||||||
Sbjct 3219734 AGTAATGAGTAGGTCTCTGCATGGATGTTCTCCATCATAATTTGGAAACCGTAAAAACAC 3219675
Query 23854 CTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATA 23913
| || || | | |||||| ||| | | ||||||| | | || || ||||| || |||
Sbjct 3219674 TTTGCCTCGGGAATTTGAACTTCACCAGAGAATCTTTCAACCAAGTTCTCGTTGACGATA 3219615
Query 23914 CCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA--GTTG 23971
||||| |||||||||||| ||||| ||| |||||| ||| |||||| ||
Sbjct 3219614 CCATCTGAAGCAGCAAAGAATGCAAGGACACGAGAGATAAAAAATCTCTCATCATCATTA 3219555
Query 23972 ATA-ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030
| | | | ||| ||| | || || ||| |||||||| ||| ||| | ||||| |||
Sbjct 3219554 AGACGGTGCTCCCAGTCACTGATGTCCTTTCCTAAATCAATTTCTTCAGCAGTCCAGAAA 3219495
Query 24031 CTTGCCAAGGCACGCTTATACATTAGCCAAATATCAT 24067
||| || |||| |||||| ||||||| ||||
Sbjct 3219494 GAAGCCTCAGCCTGCTTGTACATTTGCCAAATCTCAT 3219458
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521487973925600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |