Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq87 188 5e-43 >seq87 Length=222757 Score = 188 bits (208), Expect = 5e-43 Identities = 494/747 (66%), Gaps = 24/747 (3%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 |||||||| ||| | ||| | || | | || || || || ||| | |||| || Sbjct 40307 TTAAACAGACATTTTCATCTCGATCTTGGATTGCGGCTTGTATCCTTCAACAATAAAATC 40366 Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652 || | |||| || ||||| || |||| ||| ||||| | | || ||||| Sbjct 40367 TTCATATCTAAAATCGTCAATATCTGTTACATCTCTTGCAAAACGTAAAGTGGGAAAGTT 40426 Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712 | |||| ||||| | | || | | |||| || |||| || || |||||| |||||| Sbjct 40427 TGTAGGTGTTCGTGCGATTTGGACTCTAAGTGCGTCAACATGGTCAGCATAGACGTGAGC 40486 Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATT--AGTGACATGAGCAATCATG 101770 |||||| || |||||||| || || ||| |||| ||| | || ||||| ||||| Sbjct 40487 ATCTCCCATTGTATGGATGAAATCGCCA--CACTCTATTCCACATACTTGAGCGATCATC 40544 Query 101771 CAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGAT 101830 |||| | | ||| ||| || || || || || || || ||||| ||| | Sbjct 40545 TTTGTTAGCAACGCGTAGGAAGCGATATTGAAGGGGACACCCAAGCCCATGTCACAACTT 40604 Query 101831 CTTTGATACAGTTGACAGGAAAGCTTT------CCATCAC---AG---ACATAAAATTGA 101878 ||||| |||||||| ||||| |||| | |||| || || |||||||| ||| Sbjct 40605 CTTTGGTACAGTTGGCAGGAGAGCTCTTTTCTGCCATTACGAAAGCTAACATAAAACTGA 40664 Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACAC 101938 ||||||||||| || || | |||| | | || || | | ||||| || || Sbjct 40665 GAGAATACATGACAGGGTGGTAGAGCCATATCATTCATATCGGCAGGGTTCCATGCCGAC 40724 Query 101939 ATTAACATCCTTCTATC-TGTAGGGTTTGTTT---TTATAGTATCAATCAACTGTTTTAA 101994 || | ||||||| ||| | | | || | ||| || | | |||| || ||| | Sbjct 40725 ATGATAATCCTTCGATCATATGGAGTCTCTTTGATTTTTCGAATCA--CATCTGCC--AG 40780 Query 101995 TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054 || || ||||| | ||| ||||||| || ||| ||||| || || ||||| Sbjct 40781 CTGATCCACTCCCTTTCCAGTATAATCTGTATCACAGTCTTCATATTTGGCACCAAAATG 40840 Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAG 102114 | ||| ||||||||||| |||||||| ||||||||||| ||| | | | || | Sbjct 40841 ACGCCATTGAAATCCATAGACAGGTCCTAGATCTCCTTCGCGTCTATGCTGTAGTCCTCG 40900 Query 102115 TTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAG 102174 |||||||| ||| ||| |||||| ||||||| ||||| ||||| | || || Sbjct 40901 TTTATCTAGAAACTCTCTGCTTCCATTTCCATCCCATATGTGAACGCCTCTATCCGAGAG 40960 Query 102175 CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234 |||| || ||||| || | | |||||| ||||| ||||| | |||||| | | Sbjct 40961 TAATTTGGAATCGGTAGAGCCCTTTACAAACCATAACAGCTCTTCTAAGACACCTTTAAA 41020 Query 102235 AAATACTCTCTTAGTAGTTAAAAGTGG 102261 | ||||| || |||||||| || || Sbjct 41021 GTAAACTCTTTTCGTAGTTAATAGAGG 41047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361250469143666