Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq87 188 5e-43
>seq87
Length=222757
Score = 188 bits (208), Expect = 5e-43
Identities = 494/747 (66%), Gaps = 24/747 (3%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592
|||||||| ||| | ||| | || | | || || || || ||| | |||| ||
Sbjct 40307 TTAAACAGACATTTTCATCTCGATCTTGGATTGCGGCTTGTATCCTTCAACAATAAAATC 40366
Query 101593 ATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACGG 101652
|| | |||| || ||||| || |||| ||| ||||| | | || |||||
Sbjct 40367 TTCATATCTAAAATCGTCAATATCTGTTACATCTCTTGCAAAACGTAAAGTGGGAAAGTT 40426
Query 101653 TCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAGC 101712
| |||| ||||| | | || | | |||| || |||| || || |||||| ||||||
Sbjct 40427 TGTAGGTGTTCGTGCGATTTGGACTCTAAGTGCGTCAACATGGTCAGCATAGACGTGAGC 40486
Query 101713 ATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATT--AGTGACATGAGCAATCATG 101770
|||||| || |||||||| || || ||| |||| ||| | || ||||| |||||
Sbjct 40487 ATCTCCCATTGTATGGATGAAATCGCCA--CACTCTATTCCACATACTTGAGCGATCATC 40544
Query 101771 CAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGAT 101830
|||| | | ||| ||| || || || || || || || ||||| ||| |
Sbjct 40545 TTTGTTAGCAACGCGTAGGAAGCGATATTGAAGGGGACACCCAAGCCCATGTCACAACTT 40604
Query 101831 CTTTGATACAGTTGACAGGAAAGCTTT------CCATCAC---AG---ACATAAAATTGA 101878
||||| |||||||| ||||| |||| | |||| || || |||||||| |||
Sbjct 40605 CTTTGGTACAGTTGGCAGGAGAGCTCTTTTCTGCCATTACGAAAGCTAACATAAAACTGA 40664
Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACAC 101938
||||||||||| || || | |||| | | || || | | ||||| || ||
Sbjct 40665 GAGAATACATGACAGGGTGGTAGAGCCATATCATTCATATCGGCAGGGTTCCATGCCGAC 40724
Query 101939 ATTAACATCCTTCTATC-TGTAGGGTTTGTTT---TTATAGTATCAATCAACTGTTTTAA 101994
|| | ||||||| ||| | | | || | ||| || | | |||| || ||| |
Sbjct 40725 ATGATAATCCTTCGATCATATGGAGTCTCTTTGATTTTTCGAATCA--CATCTGCC--AG 40780
Query 101995 TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054
|| || ||||| | ||| ||||||| || ||| ||||| || || |||||
Sbjct 40781 CTGATCCACTCCCTTTCCAGTATAATCTGTATCACAGTCTTCATATTTGGCACCAAAATG 40840
Query 102055 CCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAG 102114
| ||| ||||||||||| |||||||| ||||||||||| ||| | | | || |
Sbjct 40841 ACGCCATTGAAATCCATAGACAGGTCCTAGATCTCCTTCGCGTCTATGCTGTAGTCCTCG 40900
Query 102115 TTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAG 102174
|||||||| ||| ||| |||||| ||||||| ||||| ||||| | || ||
Sbjct 40901 TTTATCTAGAAACTCTCTGCTTCCATTTCCATCCCATATGTGAACGCCTCTATCCGAGAG 40960
Query 102175 CTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCA 102234
|||| || ||||| || | | |||||| ||||| ||||| | |||||| | |
Sbjct 40961 TAATTTGGAATCGGTAGAGCCCTTTACAAACCATAACAGCTCTTCTAAGACACCTTTAAA 41020
Query 102235 AAATACTCTCTTAGTAGTTAAAAGTGG 102261
| ||||| || |||||||| || ||
Sbjct 41021 GTAAACTCTTTTCGTAGTTAATAGAGG 41047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361250469143666
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |