Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq32 93.3 4e-14 >seq32 Length=396137 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || || || || || || |||| || | | Sbjct 381433 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCT 381374 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| || ||| ||||| || ||| | ||| ||| ||| Sbjct 381373 GACACCATCGATAATGTTAAGACCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAA 381314 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||||||||||||||| || || ||||| || ||| || |||| | | || ||||| Sbjct 381313 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAAC 381254 Query 29142 ATTCAGAAGGAATCTACTCTTCAC 29165 ||||| ||||| |||||||| ||| Sbjct 381253 ATTCAAAAGGAGTCTACTCTCCAC 381230 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||| ||||| || |||||| || ||| | | Sbjct 381661 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTCGAATCTTCT 381602 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || || || || ||| | ||| ||| ||| Sbjct 381601 GATACTATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 381542 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| |||||||| ||||| ||||| || ||| | ||| | | || ||||| Sbjct 381541 CAAAGACTCATCTTTGCTGGCAAGCAACTCGAGGATGGCCGTACTCTCTCTGACTACAAC 381482 Query 29142 ATTCAGAAGGAATCTACTCTTCAC 29165 || || ||||| |||||||||||| Sbjct 381481 ATCCAAAAGGAGTCTACTCTTCAC 381458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428335133422730