Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq32 105 6e-18
>seq32
Length=396137
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| || || || || | ||| |||| || | ||||||||||| || ||||| |||||
Sbjct 380519 GTTACCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 380578
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
| |||||| | |||| |||| ||| || || || | ||||| | || |||||
Sbjct 380579 AGAGAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGG 380638
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
||| | ||| |||||||| |||||| || || | | ||| || ||| | |||
Sbjct 380639 GGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTC 380698
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| | || |||||||| ||||||||
Sbjct 380699 GACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037
||| ||||||||||| ||||| ||||| | || || || | ||||| || || |||||
Sbjct 381464 AGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCGAGTTGCTTGCC 381523
Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097
||| | || ||||| || ||||| ||| | || |||||||| |||||| ||
Sbjct 381524 AGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 381583
Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157
|| | | | | ||||||| | || || | |||||| |||||||| || || ||
Sbjct 381584 GACATTGTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTCTTGCCAGTCAAGGT 381643
Query 21158 TTTGACAAATATTTGCAT 21175
||||| || ||||||||
Sbjct 381644 CTTGACGAAGATTTGCAT 381661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422258345716856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |