Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq32 105 6e-18 >seq32 Length=396137 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || || || | ||| |||| || | ||||||||||| || ||||| ||||| Sbjct 380519 GTTACCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 380578 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | |||||| | |||| |||| ||| || || || | ||||| | || ||||| Sbjct 380579 AGAGAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGG 380638 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | ||| |||||||| |||||| || || | | ||| || ||| | ||| Sbjct 380639 GGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTC 380698 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || |||||||| |||||||| Sbjct 380699 GACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| ||||||||||| ||||| ||||| | || || || | ||||| || || ||||| Sbjct 381464 AGTAGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGGCCATCCTCGAGTTGCTTGCC 381523 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| | || ||||| || ||||| ||| | || |||||||| |||||| || Sbjct 381524 AGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTT 381583 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | | | ||||||| | || || | |||||| |||||||| || || || Sbjct 381584 GACATTGTCAATAGTATCAGAAGATTCGACCTCAAGGGTAATAGTCTTGCCAGTCAAGGT 381643 Query 21158 TTTGACAAATATTTGCAT 21175 ||||| || |||||||| Sbjct 381644 CTTGACGAAGATTTGCAT 381661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258345716856