Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq32 98.7 8e-16
>seq32
Length=396137
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| || ||||| ||||| || |||||| || ||| | |
Sbjct 381661 ATGCAAATCTTCGTCAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTCGAATCTTCT 381602
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | || ||||| || || || || || ||| | ||| ||| |||
Sbjct 381601 GATACTATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 381542
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| |||||||| ||||| ||| | || ||| | ||| | | || |||||
Sbjct 381541 CAAAGACTCATCTTTGCTGGCAAGCAACTCGAGGATGGCCGTACTCTCTCTGACTACAAC 381482
Query 25215 ATTCAAAAGGAATCTACTCTTCAC 25238
|| |||||||| ||||||||||||
Sbjct 381481 ATCCAAAAGGAGTCTACTCTTCAC 381458
Score = 93.3 bits (102), Expect = 3e-14
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| || ||| | ||| ||| |||||||||||||||||||| || || ||| | ||
Sbjct 381340 GATAAGGAGGGTATTCCCCCAGACCAACAAAGACTTATCTTTGCTGGTAAGCAACTCGAG 381281
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238
||| || |||| | | || ||||| ||||||||||| |||||||| |||
Sbjct 381280 GATGGCAGAACTCTTTCTGACTACAACATTCAAAAGGAGTCTACTCTCCAC 381230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410795968906724
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |