Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq32 111 1e-19
seq90 102 7e-17
>seq32
Length=396137
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || ||||| || || |||||||| || | || | || ||
Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCC 380600
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| || |||||| |||| ||||| || || || || || |||||||||||||||
Sbjct 380601 AACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380660
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||||||||||| ||| | || |||
Sbjct 380661 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTTG 380720
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||||||||| || ||||| || |||||
Sbjct 380721 CCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|| ||||||| || ||||| ||||| |||||||| ||| | || | ||||||
Sbjct 380769 ACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCA 380828
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || |||||| | || | |||||| || || || || |||||||||||||||
Sbjct 380829 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380888
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| |||||| | ||||||||| | ||| | || ||
Sbjct 380889 ATCTTGGTCTTAACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTA 380948
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || || || || |||||
Sbjct 380949 CCAGTGAGGGTCTTGACGAAGATTTGCAT 380977
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || || |||||||| ||||||||||| | ||| || |||||||
Sbjct 380997 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCG 381056
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || |||||| | || | |||||| || || || || || ||||||||||||
Sbjct 381057 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381116
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| |||||| | || || |||| || | || ||
Sbjct 381117 ATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTA 381176
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| |||| || || || || || |||||
Sbjct 381177 CCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| || || |||||||| ||||||||||| | ||| || || ||
Sbjct 381681 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCC 381740
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || || |||||| | || | |||||| || || ||||| || || ||||||||| |
Sbjct 381741 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGA 381800
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||||||||| | || | || ||
Sbjct 381801 ATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTA 381860
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| || || |||||
Sbjct 381861 CCAGTAAGGGTCTTTACGAAGATTTGCAT 381889
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| |||||||| |||||||||||||| || | ||| | ||||||||| ||
Sbjct 381230 GTGGAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCGAGTTG 381289
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||| || | || || || || || || |||||||| || ||| ||
Sbjct 381290 CTTACCAGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTT 381349
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||||| | |||| |||||| | ||| || |||| || | || || || ||
Sbjct 381350 GGTCTTAACATTATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTACCAGT 381409
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
||||| || || || || |||||
Sbjct 381410 GAGAGTCTTGACGAAGATTTGCAT 381433
>seq90
Length=207308
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| |||||||| ||||| ||||||||||| | ||| || ||||| || ||
Sbjct 159086 GTGGAGAGTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTG 159145
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| ||||| |||| | ||| || ||||| || || || |||||||||||| || ||
Sbjct 159146 CTTACCAGCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTT 159205
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| |||||| | ||| ||||||| ||| | || || |||||
Sbjct 159206 GGTCTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGT 159265
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| |||||
Sbjct 159266 AAGGGTCTTGACGAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829522306872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |