Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq32 105 8e-18
seq90 89.7 6e-13
>seq32
Length=396137
Score = 105 bits (116), Expect = 8e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| |||||| || || ||||| |||| || || | |||| ||
Sbjct 380541 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCTTCC 380600
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
| ||||||||||||||| || || || || ||||| | || | || ||||||||| |
Sbjct 380601 AACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 380660
Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|| || |||| ||| | | | ||||| || || || |||| |||||||| ||
Sbjct 380661 ATCTTGGTCTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGTCTT 380719
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| ||||||||||||||
Sbjct 380720 GCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 102 bits (112), Expect = 9e-17
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| || ||||| || |||||||||| ||||| || |||| ||
Sbjct 381681 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCC 381740
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|| |||||||||||||| || | ||||| ||||| | || | | ||||||| | ||
Sbjct 381741 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGT-CTTG 381799
Query 43095 ATTTTTTGT-TTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152
| | || || |||| ||| | | | ||||| || || || || | |||||||| |
Sbjct 381800 AATCTTGGTCTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCT 381858
Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || || || |||||||| ||||||||||||
Sbjct 381859 TACCAGTAAGGGTCTTTACGAAGATTTGCATT 381890
Score = 93.3 bits (102), Expect = 5e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034
||||| || | ||| || ||||| || |||||||||| ||||| || | || ||
Sbjct 380997 ACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCG 381056
Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094
|| |||||||||||||| || | ||||| ||||| | || | | ||||||||| |
Sbjct 381057 AGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGG 381116
Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
|| || || | | | | |||||| ||||| || |||| |||||||| ||
Sbjct 381117 ATCTTGGTCTTAACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTA 381176
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || | ||||| || |||||||||||
Sbjct 381177 CCAGTCAAGGTCTTGACGAAGATTTGCAT 381205
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || ||||| || | || || | | || || || ||||||||||||||
Sbjct 380786 CTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAA 380845
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | ||||| ||||| | || | || |||||||| | || | || || | | |||
Sbjct 380846 AATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGT-CTTGGATCTTGGTCTTAACGT 380904
Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || || || || | |||||||| || || || || ||||| |
Sbjct 380905 TGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGA 380964
Query 43171 CAAAGATTTGCAT 43183
| |||||||||||
Sbjct 380965 CGAAGATTTGCAT 380977
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||||||||| ||||| |||| ||||| | | || || || ||||||||||| ||
Sbjct 381242 CTCCTTTTGAATGTTGTAGTCAGAAAGAGTTCTGCCATCCTCGAGTTGCTTACCAGCAAA 381301
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCG 43110
|| |||| || ||||| | || | | |||||| ||| ||| | || || || |
Sbjct 381302 GATAAGTCTTTGTTGGTCTGGGGGAATACCCTCCTTATCC-TGAATCTTGGTCTTAACAT 381360
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | ||||| || || || |||| ||||| || || || || || ||||| |
Sbjct 381361 TATCGATGGTGTCAGAAGACTCTACTTCGAGAGTGATAGTCTTACCAGTGAGAGTCTTGA 381420
Query 43171 CAAAGATTTGCAT 43183
| |||||||||||
Sbjct 381421 CGAAGATTTGCAT 381433
>seq90
Length=207308
Score = 89.7 bits (98), Expect = 6e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||| || |||||||||| ||||| || |||| || || ||||||||||| ||
Sbjct 159098 CTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCAGCAAA 159157
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| | || || || || | || | | ||||||||| ||| || |||| |
Sbjct 159158 GATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 159217
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | |||||| || || || |||| |||||||| || || || || ||||| ||
Sbjct 159218 GTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTCTTGAC 159277
Query 43172 AAAGATTTGCAT 43183
|| ||||||||
Sbjct 159278 GAAAATTTGCAT 159289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816413478480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |