Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq78 129 5e-25
>seq78
Length=1347436
Score = 129 bits (142), Expect = 5e-25
Identities = 558/877 (64%), Gaps = 13/877 (1%)
Strand=Plus/Plus
Query 15943 TTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATT 16002
|||||| || ||| |||||||| || |||||||| || || || | || || ||
Sbjct 284255 TTTTTGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGAGAGATGTT 284314
Query 16003 TTCCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGCATCCCAATTCCAACAA 16062
||||| ||||| || ||||| | | | ||| || | | ||| | | |||
Sbjct 284315 CTCCATGAAATCGAAGGGATTAGTAGCATTGTAGACCTTGTTGTTTCCAAGGGAAAGCAA 284374
Query 16063 TAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTAA 16122
|||||| || || ||||| || || || || ||| | | | |||||||| | |
Sbjct 284375 TAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAG 284434
Query 16123 TTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTAT 16182
|| || | || || || || || | ||||| ||| || |||||| | || ||
Sbjct 284435 ACTACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAAT 284494
Query 16183 ATCTCTTACTACA--CTATTTAACGGAGGGTTTAATAAGTGTTTAAACATTATACAAGCA 16240
| | || ||| || ||| || ||| | | ||| ||| | | ||||||
Sbjct 284495 CTTTTCAACAACAGACTTCTTA--GGTCTGTTGACAAGGTGGCCAAAAAGCAAACAAGCG 284552
Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300
|||||| |||| ||||| || | | || ||||| || || || || | ||| |||
Sbjct 284553 AAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGC 284612
Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360
|| || || || || || | |||||| ||| |||||||||||||| ||||| |||||
Sbjct 284613 ATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCC 284672
Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttc---tatc 16417
|| || || || || ||||| | |||||| | | | || || | || |||
Sbjct 284673 TCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGG---TAGATTGATCATCAGAGATC 284729
Query 16418 cattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAAT 16477
|| || ||||| | || || | |||| ||| ||||| || || |||| ||
Sbjct 284730 CAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGGAAC 284789
Query 16478 AAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCT 16537
|| | || || || ||| ||||||||||| || ||||| || | ||
Sbjct 284790 AAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAGTCTCA 284849
Query 16538 GAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGT 16597
| ||| ||||||||||| || || || || || || || | || || | || ||
Sbjct 284850 GCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATCTGG 284909
Query 16598 ACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAA 16657
|| ||| | || || || | | ||| || || || || |||||| || |||||
Sbjct 284910 ACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCAAAG 284969
Query 16658 AACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-TGA--AAGTTTTAACCAGTCA 16714
|| || || | | ||||| | | || | ||| | | | | | | |||||||
Sbjct 284970 AAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCCCAGTCA 285029
Query 16715 GAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTA 16774
|| ||| ||| | ||| | |||||| ||||||| ||||| || |||| | ||
Sbjct 285030 CTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGAGGCCTCAGCTTGCTTG 285089
Query 16775 TACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811
||||||| ||| || || | ||| ||||| ||||
Sbjct 285090 TACATTTGCCAGATCTCATGGTACTTGATAGGGAACA 285126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511040287600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |