Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq87 129 5e-25
>seq87
Length=222757
Score = 129 bits (142), Expect = 5e-25
Identities = 394/602 (65%), Gaps = 18/602 (3%)
Strand=Plus/Minus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
|| || ||| | || ||||| ||||||||||||||| | |||||||| || ||||||
Sbjct 40879 GAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTGCCAAATATGAA 40820
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTA 20334
||| | ||| ||||| |||| | ||||| ||||| | | |||| ||| |
Sbjct 40819 GACTGTGATACAGATTATACTGGAAAGGGAGTGGATCAGCTGGCAGATGTGATTCGAAAA 40760
Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394
|| ||| || ||| | || |||| ||||| | | || |||||| || ||| ||
Sbjct 40759 ATCAAAGAGACTCCATATGATCGAAGGATTATCATGTCGGCATGGAACCCTGCCGATATG 40700
Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT-GC-----TAAT 20448
| |||||| | || || |||||| | | | || ||||| ||| || ||||
Sbjct 40699 AATGATATGGCTCTACCACCCTGTCATGTATTCTCTCAGTTTTATGTTAGCTTTCGTAAT 40640
Query 20449 ------AATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTT 20502
|| || | || || ||| |||| ||| || ||| ||||| |||||||
Sbjct 40639 GGCAGAAAAGAGCTCTCCTGCCAACTGTACCAAAGAAGTTGTGACATGGGCTTGGGTGTC 40580
Query 20503 CCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTA 20562
|| |||||||| || || ||| |||| || | ||||| || || || | ||
Sbjct 40579 CCCTTCAATATCGCTTCCTACGCGTTGCTAACAAAGATGATCGCTCAAGTATGTGGAATA 40520
Query 20563 AAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAA 20622
| || || || |||| || || ||||| || || | || | | ||| | ||
Sbjct 40519 GAGTGTGGCGATTTCATCCATACAATGGGAGATGCTCACGTCTATGCTGACCATGTTGAC 40460
Query 20623 CCTTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGA 20682
| | | | | || | ||||| ||| | | | || || ||| | || || | ||
Sbjct 40459 GCACTTAGAGTCCAAATCGCACGAACACCTACAAACTTTCCCACTTTACGTTTTGCAAGA 40400
Query 20683 ACTGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCC 20742
||| | ||||||| ||||||||| | ||| |||||| | | ||||| || || ||
Sbjct 40399 GATGTAACAGATATTGACGATTTTAGATATGAAGATTTTATTGTTGAAGGATACAAGCCG 40340
Query 20743 CATAATTCAA-TTCCA-ATGGAAATGTCTGTTTAAT-ATATATTCCAATAAACTAAATTT 20799
| ||| ||| || | ||| ||||||||||||||| |||||| ||| | | | ||||||
Sbjct 40339 C--AATCCAAGATCGAGATGAAAATGTCTGTTTAATGATATATACCAGT-ACCGAAATTT 40283
Query 20800 TA 20801
||
Sbjct 40282 TA 40281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183192400870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |