Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq78 116 4e-21
>seq78
Length=1347436
Score = 116 bits (128), Expect = 4e-21
Identities = 567/891 (64%), Gaps = 21/891 (2%)
Strand=Plus/Plus
Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971
|||||| || ||| ||||| || || ||||| ||||| ||||| || || || ||
Sbjct 284255 TTTTTGGTAGTCAGAGACTCTCTTCTCGAAGAAATTAGTCTTACCAGAGAGAGAGATGTT 284314
Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAG 14031
||||| ||||| || ||||| || | | | || || | || || | |
Sbjct 284315 CTCCATGAAATCGAAGGGATTAGTAGCATTGTAGACCTTGTTGTTTCCAAGGGAAAGCAA 284374
Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091
|||||| || || | |||||||| |||||| |||| | | | |||||| || | ||
Sbjct 284375 TAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAGAAG 284434
Query 14092 TTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150
| ||| || | || || || ||||| ||||| ||| ||||| || | ||||
Sbjct 284435 ACT-ACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAATAA 284493
Query 14151 TAATCGTAATAATTTCATTAGAAGGAGGATATTTT----AGATGTTTAAAAATTAAACAC 14206
| | || || || ||| | | || || || ||||| |||||
Sbjct 284494 TCTTTTCAACAACAGACTTCTTAGG----TCTGTTGACAAGGTGGCCAAAAAGCAAACAA 284549
Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266
|| |||||| || | ||| ||||| | | ||| | || || || || || || ||
Sbjct 284550 GCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCA 284609
Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326
||||| | || || || || |||||||| || ||| ||||| || || ||||| ||
Sbjct 284610 GGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATA 284669
Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14386
||||| || ||||| || || | | || || |||| | | || | | || |||
Sbjct 284670 CCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCAGAGATC 284729
Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446
|| || ||||| |||| || || |||||| || || | |||||||||| ||
Sbjct 284730 CAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAATGTTATCAATAGCATGGAAC 284789
Query 14447 AA-ATGTTCCTTCTCTTTAGTA--CTTGAAATGTATGTATCAATAAGTAAGCTATACATT 14503
|| | ||| ||| |||| | ||||| || | ||||||||||||||| || |
Sbjct 284790 AAGAAGTTAGC-CTCCTTAGCATCCTTGATAT--AAGTATCAATAAGTAAGGAGTAAGTC 284846
Query 14504 TCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCAT 14563
|||| || || || ||||| || || || || || ||||| | || || |
Sbjct 284847 TCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAATC 284906
Query 14564 TGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623
|| ||||| | ||||| || | | || ||||| || |||||||| || |||
Sbjct 284907 TGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAGCA 284966
Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGA---GTTTTTTCCAA 14680
|| || || | | |||||| || ||| |||| | | | | || |||
Sbjct 284967 AAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCCCAG 285026
Query 14681 TCGGCTAA-ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739
|| |||| |||||| |||||| | || ||| | ||||| ||| || ||||||
Sbjct 285027 TC-ACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGAGGCCTCAGCTTG 285085
Query 14740 TTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT 14790
|| |||||| ||| || || | || ||||| || | ||||||||
Sbjct 285086 CTTGTACATTTGCCAGATCTCATGGTACTTGATAGGGAACAAGACAAATCT 285136
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482344599132880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |