Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq32 93.3 3e-14 >seq32 Length=396137 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/237 (70%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 18090 TTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTG 18149 ||| |||| || || || || | || |||| ||| || || || || || || |||||| Sbjct 380515 TTTAGTTA-CCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTG 380573 Query 18150 TAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGA 18209 ||||| | | ||| | | |||||||| || || || || ||||||| | |||||| Sbjct 380574 TAGTCAGAGAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGG 380633 Query 18210 TCCACGGGCACGCCTTCCTTATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACC 18268 || ||| | ||| ||||| || | | ||| | |||||| | | | |||||| Sbjct 380634 TCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGT-CTTGACGTTGTCGATGGTGTCAGA 380692 Query 18269 GGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 | |||| || | ||||||| | |||||||||| || || ||||| |||||||| Sbjct 380693 AGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | |||||| || || || ||||| ||||||||||| | Sbjct 381435 CCACCACGGAGACGAAGGACGAGGTGAAGAGTAGACTCCTTTTGGATGTTGTAGTCAGAG 381494 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||| || | ||| ||||| ||| |||| ||||||||||| || ||| Sbjct 381495 AGAGTACGGCCATCCTCGAGTTGCTTGCCAGCAAAGATGAGTCTTTGTTGGTCTGGGGGA 381554 Query 18219 ACGCCTTCCTTATC-GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | || ||||| || | | ||| | |||||| | ||| ||| ||| | ||| Sbjct 381555 ATACCCTCCTTGTCTTGGATCTTGGT-CTTGACATTGTCAATAGTATCAGAAGATTCGAC 381613 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| || | ||||| ||||| || || || || |||||||| Sbjct 381614 CTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCAT 381661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343232539670