Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq87 141 2e-28
seq155 86.0 1e-11
>seq87
Length=222757
Score = 141 bits (156), Expect = 2e-28
Identities = 232/332 (70%), Gaps = 18/332 (5%)
Strand=Plus/Minus
Query 35385 ATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTG 35444
||||| || |||||| | ||||| || || ||||| ||||||||||||||||||||
Sbjct 40887 ATAGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTGCCA 40828
Query 35445 AATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT---A 35501
||||||| |||| | | ||||||||||||||||| | ||||| |||| || |
Sbjct 40827 AATATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCAGCTGGCAGATGTGA 40768
Query 35502 TACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATC 35561
| | ||| | | | ||| | |||| ||||| ||||||| || ||| |||||||||| |
Sbjct 40767 TTCGAAAAA---TCAAAGAGACTCCATATGATCGAAGGATTATCATGTCGGCATGGAACC 40711
Query 35562 CTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATG-TG 35620
|| ||| | | ||||||||| || || || || | |||| ||||||| |
Sbjct 40710 CTGCCGATATGAATGATATGGCTCTACCACCCTGTCATGTATTCTCTCAGTTTTATGTTA 40651
Query 35621 GC-----TAATGG------AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCG 35669
|| |||||| ||| | || ||||| |||| || |||| | || | |
Sbjct 40650 GCTTTCGTAATGGCAGAAAAGAGCTCTCCTGCCAACTGTACCAAAGAAGTTGTGACATGG 40591
Query 35670 GGTTGGGCGTGCCCTTCAATATTGCATCATAC 35701
| ||||| || ||||||||||| || || |||
Sbjct 40590 GCTTGGGTGTCCCCTTCAATATCGCTTCCTAC 40559
>seq155
Length=566151
Score = 86.0 bits (94), Expect = 1e-11
Identities = 184/270 (68%), Gaps = 9/270 (3%)
Strand=Plus/Minus
Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844
||| | ||| || ||||| || || || || || ||||| | ||||| ||||||||
Sbjct 482277 GCCAATTCCACCGGCAGTTTTAGATATCATCGCACAATCCTTCAAGGTATCGTAAATACC 482218
Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904
||| || ||||||| | ||| | ||||| || || ||||| || || |||
Sbjct 482217 CTCGATAGAATCATCTCTCATAGCCACTAAAAAGCAAGACGATAGTTGAGGATTGGGTGT 482158
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATC-AT 94963
||| ||||||| | || || |||||||| || || || | ||||| | ||| ||
Sbjct 482157 ACCAGAATTAAATAAAGTTGGTGAAGCATGAGTGAAGTATTTTTCAGACATCA-ATCGAT 482099
Query 94964 ATGTTTCAATGACAGATTTG--ATGTCTGATCCGTGAATGCCGACAGCCACACGCATAAT 95021
||||||| || || |||| || || |||||| || || |||||||| | ||| |
Sbjct 482098 ATGTTTCTAT--CACCTTTGGAATATCATTTCCGTGGATACCCACAGCCACTCTCATTAA 482041
Query 95022 CATGTCCTGAGGGCGCTCAACCAAGATTCT 95051
||| | || || | ||| || ||||||
Sbjct 482040 CATCTGTTGGGGCCTCTCGAC---GATTCT 482014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581895278530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |