Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq87 141 2e-28 seq155 86.0 1e-11 >seq87 Length=222757 Score = 141 bits (156), Expect = 2e-28 Identities = 232/332 (70%), Gaps = 18/332 (5%) Strand=Plus/Minus Query 35385 ATAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTG 35444 ||||| || |||||| | ||||| || || ||||| |||||||||||||||||||| Sbjct 40887 ATAGACGCGAAGGAGATCTAGGACCTGTCTATGGATTTCAATGGCGTCATTTTGGTGCCA 40828 Query 35445 AATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAAT---A 35501 ||||||| |||| | | ||||||||||||||||| | ||||| |||| || | Sbjct 40827 AATATGAAGACTGTGATACAGATTATACTGGAAAGGGAGTGGATCAGCTGGCAGATGTGA 40768 Query 35502 TACTAAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATC 35561 | | ||| | | | ||| | |||| ||||| ||||||| || ||| |||||||||| | Sbjct 40767 TTCGAAAAA---TCAAAGAGACTCCATATGATCGAAGGATTATCATGTCGGCATGGAACC 40711 Query 35562 CTATGGATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATG-TG 35620 || ||| | | ||||||||| || || || || | |||| ||||||| | Sbjct 40710 CTGCCGATATGAATGATATGGCTCTACCACCCTGTCATGTATTCTCTCAGTTTTATGTTA 40651 Query 35621 GC-----TAATGG------AGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCG 35669 || |||||| ||| | || ||||| |||| || |||| | || | | Sbjct 40650 GCTTTCGTAATGGCAGAAAAGAGCTCTCCTGCCAACTGTACCAAAGAAGTTGTGACATGG 40591 Query 35670 GGTTGGGCGTGCCCTTCAATATTGCATCATAC 35701 | ||||| || ||||||||||| || || ||| Sbjct 40590 GCTTGGGTGTCCCCTTCAATATCGCTTCCTAC 40559 >seq155 Length=566151 Score = 86.0 bits (94), Expect = 1e-11 Identities = 184/270 (68%), Gaps = 9/270 (3%) Strand=Plus/Minus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||| | ||| || ||||| || || || || || ||||| | ||||| |||||||| Sbjct 482277 GCCAATTCCACCGGCAGTTTTAGATATCATCGCACAATCCTTCAAGGTATCGTAAATACC 482218 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||| || ||||||| | ||| | ||||| || || ||||| || || ||| Sbjct 482217 CTCGATAGAATCATCTCTCATAGCCACTAAAAAGCAAGACGATAGTTGAGGATTGGGTGT 482158 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATC-AT 94963 ||| ||||||| | || || |||||||| || || || | ||||| | ||| || Sbjct 482157 ACCAGAATTAAATAAAGTTGGTGAAGCATGAGTGAAGTATTTTTCAGACATCA-ATCGAT 482099 Query 94964 ATGTTTCAATGACAGATTTG--ATGTCTGATCCGTGAATGCCGACAGCCACACGCATAAT 95021 ||||||| || || |||| || || |||||| || || |||||||| | ||| | Sbjct 482098 ATGTTTCTAT--CACCTTTGGAATATCATTTCCGTGGATACCCACAGCCACTCTCATTAA 482041 Query 95022 CATGTCCTGAGGGCGCTCAACCAAGATTCT 95051 ||| | || || | ||| || |||||| Sbjct 482040 CATCTGTTGGGGCCTCTCGAC---GATTCT 482014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989581895278530