Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq32 86.0 6e-12
>seq32
Length=396137
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||||||||| ||||||||||| | || | |||||| ||||| ||||||
Sbjct 381693 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTGCTTACCA 381752
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| | |||| ||| || || || ||||| || ||||| ||||| ||| || ||
Sbjct 381753 GCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTG 381812
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || || |||| ||| | ||||| || || | ||
Sbjct 381813 ACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGTAAGGGTC 381872
Query 143168 TTTACGAATATTTGCAT 143184
|||||||| ||||||||
Sbjct 381873 TTTACGAAGATTTGCAT 381889
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||||||||| ||||||||||| | || | || |||||||| ||||||
Sbjct 381009 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTGCTTACCA 381068
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| | |||| ||| || || || || || || || || ||||| | | || || ||
Sbjct 381069 GCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTC-TTGGATCTTGGTCTT 381127
Query 143108 AGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | | || | ||||| | | ||| ||||| | ||| | ||||| || ||||| ||
Sbjct 381128 AACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGTCAAGGT 381187
Query 143167 TTTTACGAATATTTGCATA 143185
|| ||||| |||||||||
Sbjct 381188 CTTGACGAAGATTTGCATA 381206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507013347945120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |