Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq32 86.0 6e-12 >seq32 Length=396137 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||||||||| ||||||||||| | || | |||||| ||||| |||||| Sbjct 381693 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTGCTTACCA 381752 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || | |||| ||| || || || ||||| || ||||| ||||| ||| || || Sbjct 381753 GCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTG 381812 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||| | | || || |||| ||| | ||||| || || | || Sbjct 381813 ACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGTAAGGGTC 381872 Query 143168 TTTACGAATATTTGCAT 143184 |||||||| |||||||| Sbjct 381873 TTTACGAAGATTTGCAT 381889 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||||||||| ||||||||||| | || | || |||||||| |||||| Sbjct 381009 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTGCTTACCA 381068 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || | |||| ||| || || || || || || || || ||||| | | || || || Sbjct 381069 GCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTC-TTGGATCTTGGTCTT 381127 Query 143108 AGC-TGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166 | | | || | ||||| | | ||| ||||| | ||| | ||||| || ||||| || Sbjct 381128 AACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGTCAAGGT 381187 Query 143167 TTTTACGAATATTTGCATA 143185 || ||||| ||||||||| Sbjct 381188 CTTGACGAAGATTTGCATA 381206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013347945120