Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq87 91.5 2e-13
>seq87
Length=222757
Score = 91.5 bits (100), Expect = 2e-13
Identities = 263/401 (66%), Gaps = 18/401 (4%)
Strand=Plus/Plus
Query 6847 TGAGCATCTCCTAGCGTATGAATAAATTCACCTGGTTTCATATCAACAG-CTTGAGCAAT 6905
||||||||||| | ||||| || || || || | || || ||| ||||||| ||
Sbjct 40482 TGAGCATCTCCCATTGTATGGATGAAATCGCCACACTCTAT-TCCACATACTTGAGCGAT 40540
Query 6906 TAAATATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGC 6965
| | ||||| || || || ||||| | ||| || || ||||| || ||||| ||
Sbjct 40541 CATCTTTGTTAGCAACGCGTAGGAAGCGATATTGAAGGGGACACCCAAGCCCATGTCACA 40600
Query 6966 TGATCTTTGATAACATTGACAAGATAAAATATTGTCTA-------------TAGCATAAA 7012
|||||| || ||| || || | | || ||| || ||||||
Sbjct 40601 ACTTCTTTGGTACAGTTGGCAGGAGAGC-TCTTTTCTGCCATTACGAAAGCTAACATAAA 40659
Query 7013 ATTGACACAATACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAG 7072
| ||| | ||||||||||| || |||| | | | || ||||| | || ||||| |
Sbjct 40660 ACTGAGAGAATACATGACAGGGTGGTAGAGCCATATCATTCATATCGGCAGGGTTCCATG 40719
Query 7073 CAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTG-T 7131
| | ||| | ||| | || ||||| |||| | ||| | |||| || | || ||
Sbjct 40720 CCGACATGATAATCCTTCGATCATATGGAGTCTCTTTGATTTTTCGAATCA-CATCTGCC 40778
Query 7132 AATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAA 7191
| ||||| | |||| || ||||| |||| ||| | | ||| || || ||||||
Sbjct 40779 AGCTGATCCACTCCCTTTCCAGTATAATCTGTATCACAGTCTTCATATTTGGCACCAAAA 40838
Query 7192 TGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTC 7232
|| | ||||||||| ||||| | ||| |||| ||| |||||
Sbjct 40839 TGACGCCATTGAAATCCATAGACAGGTCCTAGATCTCCTTC 40879
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595870763565600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |