Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq117 185 1e-42 seq94 165 1e-36 >seq117 Length=53253 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||| | | ||| |||||| || ||||| ||||| || |||||||| || | Sbjct 11806 CGCTAAGCGTCACAGAAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCCA 11748 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| |||||||||||||| ||||||||| |||||| | |||||||||||| Sbjct 11747 TCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCTCTTATCTATGAAGAGA 11688 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | ||| |||||| || |||| || | |||||| || ||||| | Sbjct 11687 CCCGTGGAGTTCTCAAGTCATTCCTCGAGTCCGTCATTCGTGATGCCGTCACTTATACTG 11628 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 | ||||| || | |||||||| || || | ||| ||||||| || | || | |||| Sbjct 11627 AACACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTCGTCTACGCTCTCAAGAGACAAG 11568 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | |||||||| || ||||| Sbjct 11567 GCCGTACTTTGTATGGTTTCGGTGGTTAA 11539 >seq94 Length=175302 Score = 165 bits (182), Expect = 1e-36 Identities = 199/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| |||||| || ||||||||||| || |||||||| ||||| Sbjct 125244 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATCCAAGGTATTACCAAGCCTGCTAT 125186 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||||||| | | ||||| ||||||||| |||||| | |||| ||||||| Sbjct 125185 CCGTCGTCTGGCAAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAAGAGAC 125126 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || | ||| ||||||| || | || |||| |||||| || ||| || || Sbjct 125125 CCGTGGAGTCCTCAAGTCCTTCCTCGAGTCTGTCATCCGCGATGCTGTCACCTACACTGA 125066 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||||| | || | ||||| || | || | ||||| Sbjct 125065 GCACGCCAAGAGAAAGACCGTCACCTCTCTCGACGTTGTCTACGCCCTCAAGAGACAAGG 125006 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| |||| ||||| || ||||| Sbjct 125005 CCGTACCCTTTACGGTTTCGGTGGTTAA 124978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075048225038