Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq117 185 1e-42
seq94 165 1e-36
>seq117
Length=53253
Score = 185 bits (204), Expect = 1e-42
Identities = 204/269 (76%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
|||||||||||| | | ||| |||||| || ||||| ||||| || |||||||| || |
Sbjct 11806 CGCTAAGCGTCACAGAAAGAT-TCTTCGTGACAACATTCAAGGTATTACCAAGCCTGCCA 11748
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||||||||| |||||||||||||| ||||||||| |||||| | ||||||||||||
Sbjct 11747 TCCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCTCTTATCTATGAAGAGA 11688
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|||| ||| | ||| |||||| || |||| || | |||||| || ||||| |
Sbjct 11687 CCCGTGGAGTTCTCAAGTCATTCCTCGAGTCCGTCATTCGTGATGCCGTCACTTATACTG 11628
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
| ||||| || | |||||||| || || | ||| ||||||| || | || | ||||
Sbjct 11627 AACACGCCAAGAGAAAGACTGTTACTTCTCTCGATGTCGTCTACGCTCTCAAGAGACAAG 11568
Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||||| | |||||||| || |||||
Sbjct 11567 GCCGTACTTTGTATGGTTTCGGTGGTTAA 11539
>seq94
Length=175302
Score = 165 bits (182), Expect = 1e-36
Identities = 199/268 (74%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| |||||| || ||||||||||| || |||||||| |||||
Sbjct 125244 GCCAAGCGTCACAGAAAGAT-TCTTCGTGACAACATCCAAGGTATTACCAAGCCTGCTAT 125186
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||||||| | | ||||| ||||||||| |||||| | |||| |||||||
Sbjct 125185 CCGTCGTCTGGCAAGAAGAGGTGGTGTCAAGCGTATCTCTGCCCTCATCTACGAAGAGAC 125126
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| || | ||| ||||||| || | || |||| |||||| || ||| || ||
Sbjct 125125 CCGTGGAGTCCTCAAGTCCTTCCTCGAGTCTGTCATCCGCGATGCTGTCACCTACACTGA 125066
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || | ||||| |||||||| | || | ||||| || | || | |||||
Sbjct 125065 GCACGCCAAGAGAAAGACCGTCACCTCTCTCGACGTTGTCTACGCCCTCAAGAGACAAGG 125006
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| |||| ||||| || |||||
Sbjct 125005 CCGTACCCTTTACGGTTTCGGTGGTTAA 124978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075048225038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |