Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq32 98.7 1e-15
seq111 96.9 3e-15
>seq32
Length=396137
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || | ||||| || | ||||| ||||| |||| ||
Sbjct 381433 ATGCAAATCTTCGTCAAGACTCTCACTGGTAAGACTATCACTCTCGAAGTAGAGTCTTCT 381374
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || |||||| || || || || || || || || |||
Sbjct 381373 GACACCATCGATAATGTTAAGACCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAA 381314
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||||| || | | || || |||||||| |||| |||| | ||||| |||
Sbjct 381313 CAAAGACTTATCTTTGCTGGTAAGCAACTCGAGGATGGCAGAACTCTTTCTGACTACAAC 381254
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|||||||| || |||||| |||| || |||||
Sbjct 381253 ATTCAAAAGGAGTCTACTCTCCACCTCGTCCT 381222
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
|| ||||||| | || ||||| || | ||||| || | ||||| | || | || ||
Sbjct 381893 CATAATGCAAATCTTCGTAAAGACCCTTACTGGTAAGACCATCACTCTTGAGGTCGAGTC 381834
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||||||||| | ||||| |||||| ||||| ||||| || ||||| ||
Sbjct 381833 TTCTGACACCATCGACAACGTCAAGACCAAGATTCAAGACAAGGAAGGTATTCCTCCAGA 381774
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||||| | | |||| || || || ||||| ||||| | | | | | || ||
Sbjct 381773 CCAACAGCGTTTGATTTTCGCTGGTAAGCAACTGGAAGACGGTCGTACTCTTTCTGATTA 381714
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| ||||||||||| ||| |||| |||||||
Sbjct 381713 CAACATCCAAAAAGAATCCACTCTCCACTTGGTCCT 381678
Score = 86.0 bits (94), Expect = 6e-12
Identities = 146/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || || || ||||| || | ||||| ||||| | ||||| |
Sbjct 381205 ATGCAAATCTTCGTCAAGACCTTGACTGGTAAGACCATCACTCTCGAAGTTGAATCTTCC 381146
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | || || ||||| ||||| || || || || || || |||
Sbjct 381145 GACACCATCGATAATGTTAAGACCAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAA 381086
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | |||| || || || |||||||| |||| | | | || || |||
Sbjct 381085 CAGCGTTTGATTTTCGCTGGTAAGCAACTCGAGGATGGCCGTACTCTTTCTGATTACAAC 381026
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||||||||| ||| |||| |||||||
Sbjct 381025 ATCCAAAAAGAATCCACTCTCCACTTGGTCCT 380994
>seq111
Length=751517
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
||||| || | |||||| |||| | || || ||||||||| || | |||||
Sbjct 299054 ACTGGTAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATTGACAATGTCAAGACC 299113
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
||||| ||||| ||||| || || || ||||||||| | || || | || || ||
Sbjct 299114 AAGATCCAGGACAAGGAAGGAATTCCCCCAGATCAACAACGTCTTATCTTCGCTGGTAAG 299173
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||||||||||| |||| | | ||||| ||||| ||||| || |||||| | ||
Sbjct 299174 CAACTCGAAGATGGCAGAACCCTTTCTGACTACAACATCCAAAAGGAGTCTACTCTTCAC 299233
Query 26973 CTGGTCCT 26980
|| |||||
Sbjct 299234 CTTGTCCT 299241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478661406775520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |