Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq79 273 6e-68 >seq79 Length=299291 Score = 273 bits (302), Expect = 6e-68 Identities = 1156/1797 (64%), Gaps = 48/1797 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGT-ATCAATGGTGATATTGTTGA 363449 ||||| | ||||| |||| | ||| ||| | ||| ||||| || | |||| ||| Sbjct 118107 TTCGGTTTCAAGACCTTGGAAAGATCTTACTTG-CTCAAGATCAACGGAAAAATTGCTGA 118165 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | || || |||||| | ||| | || ||| ||||||||||| || |||| ||| Sbjct 118166 GAGACCTCAACATATGATCATGAGAGTAGCTGTTGGTATCCATGGCGCGGACATTGCCAA 118225 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTG-CTCGTGTA-TTCACGCACGCCACGCCAACA 363567 || |||||||| || || || | || | ||| || || || || | || || Sbjct 118226 GGCCATTGAAACTTACAA--TTACATGTCACAAAAGTACTTTACTCATGCTTCTCCTACT 118283 Query 363568 ATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAAATGAA 363626 ||||||||||||| |||| || ||||| ||||| ||||| |||||| |||| ||||| Sbjct 118284 TTGTACAATGCTGGTACTCCCAAGCCACAAATGTCGTCTTG-TTTCTTGGTAAACATGAA 118342 Query 363627 GGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAA 363686 ||| || ||||| |||||||||| ||| || | |||| ||||| | || || ||| Sbjct 118343 GGATGACTCCATTGAGGGTATCTATGATACTTTGAAGACCTGTGCCTTGATCTCGAAGTC 118402 Query 363687 TGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC---ATTC 363742 |||||| || |||||| | ||||||||| | ||||| || | ||| | ||| Sbjct 118403 TGCAGGTGGTATTGGTTTGAGTATCCACAATATCCGTGCCACTG----GTTCCTATATTG 118458 Query 363743 GCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACT 363801 ||| || || |||| | || || | || || ||| | | || || |||| ||| Sbjct 118459 CCGGTACTAACGG-TACTTCTAACGGTATTGTCCCTATGTTGAGAGTTTTCAACAACACT 118517 Query 363802 GCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAG 363861 || || || || ||||| ||||| ||| | ||| || || || ||||| | ||| Sbjct 118518 GCTAGATATGTTGACCAAGGTGGTAACAAGAGACCAGGTGCTTTCGCCATGTACTTGGAG 118577 Query 363862 CCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAA 363921 ||| || | |||| ||||||| || | || | || || ||| || || || ||| Sbjct 118578 CCTTGGCACGACGATGTTTTTGAATTCATCGACTTGCGAAAGAACCACGGTAAGGAAGAA 118637 Query 363922 TTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTG 363981 | ||||| | ||| |||||| || |||||| | | ||| || |||||| | || Sbjct 118638 GTCCGTGCCAGAGATTTGTTCTTGGCCCTTTGGATCCCCGACTTGTTCATGAAGAGAGTC 118697 Query 363982 GAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTA 364041 |||| || ||||| | | | ||||| | || ||||| ||| | ||| || Sbjct 118698 AAGGCTAACGAGGATTGGACTTTGATGTGCCCTAATGAGTGTCCTGGTTTGGACGAGGTC 118757 Query 364042 TGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAG 364101 | || ||||| | |||||| || || |||||||||||| || || || | | | | Sbjct 118758 TATGGAGACGAATTTGTTGCCCTCTATGAAAAGTATGAAAAAGAAGGCAAAGGTAGAAGA 118817 Query 364102 ACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACA 364161 || || || |||||||| |||| ||| ||| | || | || | |||||| || | Sbjct 118818 ACTATCAAGGCTCAGAAGCTCTGGTATGCTATCCTTGAGGCCCAAACTGAGACTGGTAAC 118877 Query 364162 CCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACA 364221 |||| ||| | ||||| ||| | || ||| ||||| || || || |||| ||||| Sbjct 118878 CCCTTCATGCTCTACAAGGATGCTTGTAACAGCAAGAGTAATCAACAAAACCTGGGTACT 118937 Query 364222 ATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCC 364281 || | |||| | || || ||| | || ||| | |||| || || || Sbjct 118938 ATCAAATCTTCCAACTTGTGCTGTGAAATTGTCGAGTACTCTTCTCCTGAAGAAGTGGCT 118997 Query 364282 GTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT---AAAAGATGGT----ACTTT 364334 || |||||| | || || | | ||||| || ||||| || |||| | ||| Sbjct 118998 GTTTGTAACTTGGCTTCTTTGTCCCTTCCTGCTTTTGTTGAAAGTGATGATGAAGGCTTA 119057 Query 364335 TG--ACCAC---CAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 || || || || | || | || || || | | |||| | || || || | | Sbjct 119058 TGGTACAACTTTGAGAAGCTCCACGAAGTTGCCAAGGCCGTTACTAG-AAACTTGA-ATG 119115 Query 364390 --GTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATC 364447 |||| |||| || | |||||| | || || ||| | ||| | ||||| Sbjct 119116 TCATTATTGACAGAAACTTCTATCCAGTAAAGGAGGCTGAGAGAAGTAACTTCCGTCACA 119175 Query 364448 GCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCAT 364507 | || |||| |||||| | || || | ||||| | ||| ||| ||| || ||| Sbjct 119176 GACCTATTGCTCTTGGCATTCAAGGTTTAGCTGATGCTTTCATGGCTCTCCGTTTGCCAT 119235 Query 364508 TTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCG 364567 | || || ||||| || | || | | |||| |||||| || || ||| | Sbjct 119236 TCGACTCTCCTGAAGCCAAGCAATTGAACATTCAAATCTCTGAAACCATTTACCATGCTG 119295 Query 364568 CAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGG 364626 | | || | |||| ||| | || | | | || ||| || |||||||| Sbjct 119296 CTGTAGAAT-CTTCAATTGAACTTGCTGAGAAATATGGCGCCTACGAGACCTATGAGGGA 119354 Query 364627 TCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGA 364686 || ||| ||| |||| || || | || | ||| |||| || || ||| | | Sbjct 119355 TCTCCTGCTTCTAAGGGTCTTTTACAATACGACATGTGGGATGTTACTCCCACTGATCTA 119414 Query 364687 TGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTC---CCTC 364743 ||| | |||| ||| || || | ||||| ||| | | ||||| ||| Sbjct 119415 TGGGATTGGGCTACTCTTAAGAAGAAGATGGCTAAGCACGGTCTTAGAAACTCTCTTCTC 119474 Query 364744 GTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTC 364803 ||| || || ||||| || ||||| || | || |||||||| ||||| || || || Sbjct 119475 GTT---GCTCCTATGCCTACTGCTTCGACCTCCCAAATCCTCGGTAACAATGAATGTTTT 119531 Query 364804 GAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTT 364863 || || | ||| ||| | || || || | || ||| | ||||| || | | | || Sbjct 119532 GAGCCTTACACATCCAACATCTACTCTCGTAGAGTCCTTGCTGGAGAGTTCCAGATTGTC 119591 Query 364864 AATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAAC 364923 || | | | | ||||||||| |||| || |||||||||| | |||||||||| Sbjct 119592 AACCAATGGTTGTTGAAGGATCTTGTCGACTTGGGATTGTGGGGTGAAAACATGAAGAAC 119651 Query 364924 TATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAG 364983 ||||| || ||||||||| | || ||||| || |||| || || | ||| Sbjct 119652 AGAATCATTGCTAGCAATGGTTCTATTCAAAACATCCCTAACATTCCTGATGACATCAAG 119711 Query 364984 CCTATTTACAAAACCGTATGGGAAATTTC-CATGCGAACTCTCATTGATATGGCGGCCGA 365042 || | ||||| || || ||||| | || || | || ||||||||||||| || || Sbjct 119712 GCTTTATACAAGACTGTTTGGGAGCTCTCTCAAAAG-ACAATCATTGATATGGCTGCTGA 119770 Query 365043 TCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG--CCAACC 365100 || | ||| | ||| ||| || || || || ||| || || | || || || Sbjct 119771 CCGTGCTGCATATATTGATCAAAGTCAATCTTTGAAC--ATCTATATCCAAGCTCCTACT 119828 Query 365101 TCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGT 365157 | |||| | || ||||||||||| || ||| || ||||| ||||||||| Sbjct 119829 ATGGGCAAGTTGACCAGTATGCATTTCTATGGATGGCAAAAGGGTCTCAAGACAGGT 119885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350827929812