Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq32 102 7e-17
>seq32
Length=396137
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || || ||||||||||| || ||||||||||| | | |||| || ||||
Sbjct 380538 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCTGCCGTCT 380597
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
||||| || || || || | ||||| || |||||||| || | |||||| |||||
Sbjct 380598 TCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 380657
Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902
| | ||| | ||| || | | | | ||||| | ||| || | |||||||||
Sbjct 380658 TGGATCTTGGT-CTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCGAGGGTGATGGT 380716
Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|| |||||||| || |||||||| || |||||
Sbjct 380717 CTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || |||||||||||||| ||||||||||||| | |||| | | ||||| | |||
Sbjct 380775 TGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCAAGTTGC 380834
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGCAATTTG 16851
|| || || |||| | ||||||||||| || | |||||| ||||| | | |||
Sbjct 380835 TTACCAGCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTG 380894
Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911
| ||| || | | | | |||||| | ||| || | ||||||||| || || ||
Sbjct 380895 GT-CTTAACGTTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACCAGT 380953
Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935
|| || ||||| || || |||||
Sbjct 380954 GAGGGTCTTGACGAAGATTTGCAT 380977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405087180456340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |