Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq78 253 2e-62
>seq78
Length=1347436
Score = 253 bits (280), Expect = 2e-62
Identities = 533/784 (68%), Gaps = 17/784 (2%)
Strand=Plus/Plus
Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976
||||||||| ||||| ||||| || ||||| ||| |||| | | | ||||||||| ||
Sbjct 284372 CAATAATCTGTCAGCGACAAACTCAATGTATTGACACATGAGCTTAGCATTCATTCCAAG 284431
Query 92977 AAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035
||||| |||| || | || || |||||||| || || || || | || ||||| | |
Sbjct 284432 AAGAC-TACATGGCAAGGCATCAGTCAAGAATTCCTTTTCAATACCGACAGCTTCAGTAA 284490
Query 93036 AGATTTCTATTACTCTACT-ATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCAC 93094
|| || || | || | || | | | | | |||| | || || |||||
Sbjct 284491 TAAT--CTTTTCAACAACAGACTTCTTAGGTCTGTT--GACA-AGGTGGCCAAAAAGCAA 284545
Query 93095 GCAA----AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| | || || || | ||||| || || || ||||||||||| ||| || ||
Sbjct 284546 ACAAGCGAAATCAGTGTGCATGCCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAA 284605
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||| | |||||| || |||||| |||||| || ||
Sbjct 284606 ACCAGGCATAAGACCACGCTTCTTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAA 284665
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270
||||| || || || || || || || | ||| || ||||| | | || |
Sbjct 284666 GATACCCTCGACAGCAGCGAAAGCAACGAGACGCTCAGCAAAGGTAGATTGATCATCAGA 284725
Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGT 93329
|||||| ||| ||||| || || || |||||||||||||| | |||| || ||||| |
Sbjct 284726 GATCCAAGTTAGGGCCCAGTCAGCCTTCTTCTTAATACAAGGAA-TGTTATCAATAGCAT 284784
Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389
|| | | | | ||| | | ||| || || ||||| || | | || ||
Sbjct 284785 GGAACAAGAAGTTAGCCTCCTTAGCATCCTTGATATAAGTATCAATAAGTAAGGAGTAAG 284844
Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449
| |||| ||||| ||||||||| |||||||||||||||||||| | || || | |
Sbjct 284845 TCTCAGCATGGATATTCTCCATCATGATTTGGAATCCGTAGAAACACTTGGCCTCAGGAA 284904
Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509
|||| || || ||| |||||||| || || || |||||||| ||||||||||| || |
Sbjct 284905 TCTGGACCTCACCAGAGAATCTCTCAACAAGGTTCTCATTGACAATACCATCGGAGGCAG 284964
Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCC 93566
|||| ||||| | | | | ||||| | |||||||||| |||| | | ||||
Sbjct 284965 CAAAGAAAGCGAGCACACGAGAGATAAAGAATCTCTCATCATCATTAAGACGGTGTTCCC 285024
Query 93567 AATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTT 93626
| || | ||| ||| |||||| | ||||| ||||||| || || || || ||||
Sbjct 285025 AGTCACTAATATCCTTTCCAAGATCAATCTCTTCAGCAGTCCAGAAAGAGGCCTCAGCTT 285084
Query 93627 TTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGT 93686
|||||||| | ||| || || || || | || || || | |||||| | |||||||
Sbjct 285085 GCTTGTACATTTGCCAGATCTCATGGTACTTGATAGGGAACAAGACAAATCTGTTAGGGT 285144
Query 93687 TATC 93690
| ||
Sbjct 285145 TCTC 285148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556859644513840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |