Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq32 122 7e-23 seq90 100 2e-16 >seq32 Length=396137 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||||||||| ||||||||||| Sbjct 381660 ATACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCA 381719 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||||| ||||| ||||| ||||||||| | || | |||||||||||| ||| Sbjct 381720 GAAAGAGTACGACCGTCTTCCAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGA 381779 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| |||||| || | | || | |||||| | || ||| Sbjct 381780 GGAATACCTTCCTTGTCTTGAATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCG 381839 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || || || || ||||| || || ||||| Sbjct 381840 ACCTCAAGAGTGATGGTCTTACCAGTAAGGGTCTTTACGAAGATTTGCAT 381889 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || ||||||||||| ||||||||||| Sbjct 380976 ATACCACCACGGAGACGGAGGACCAAGTGGAGAGTGGATTCTTTTTGGATGTTGTAATCA 381035 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | |||||| ||| || ||||| ||||||||| | || | |||||||||||| || Sbjct 381036 GAAAGAGTACGGCCATCCTCGAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGG 381095 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 ||||| || || ||||| ||| || || ||| | | || | |||||||| ||||| Sbjct 381096 GGAATACCCTCCTTGTCTTGGATC-TTGGTCTTAACATTATCGATGGTGTCGGAAGATTC 381154 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || || |||| || || || || || ||||| Sbjct 381155 AACTTCGAGAGTGATGGTCTTACCAGTCAAGGTCTTGACGAAGATTTGCAT 381205 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||||| || | || || || ||||| |||||||| ||| Sbjct 380748 ATACCACCACGCAGACGAAGGACTAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCG 380807 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||| |||||||| ||||||||| | || | |||||||||||| || Sbjct 380808 GAAAGGGTTCTTCCATCCTCAAGTTGCTTACCAGCGAAAATCAAACGCTGTTGGTCTGGG 380867 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 |||||||| || ||||| ||| || || ||| | | || | |||||||| || || Sbjct 380868 GGAATGCCCTCCTTGTCTTGGATC-TTGGTCTTAACGTTGTCGATGGTGTCGGAAGACTC 380926 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || | ||| | || || || || || || || || || || ||||| Sbjct 380927 GACCTCAAGGGTGATGGTCTTACCAGTGAGGGTCTTGACGAAGATTTGCAT 380977 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||||||||| || | | || || || | || || || || || |||||||| || Sbjct 380521 TACCGCCACGGAGACGGAGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 380580 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 | || | ||||| | || ||||||||| |||| ||||| |||||||| || | Sbjct 380581 AGAGGGTTCTGCCGTCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGG 380640 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 ||||||| || ||||| ||||| || | | || | |||||| | || |||| Sbjct 380641 GAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCAGAAGACTCGA 380700 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | ||| | || |||||||||||||| || ||||| || ||||| Sbjct 380701 CCTCGAGGGTGATGGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749 >seq90 Length=207308 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || ||||| ||||||||||| | ||||||| || |||||||| |||||| Sbjct 159093 GTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCA 159152 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | ||| ||||| || || ||||| || || ||||| ||||| || Sbjct 159153 GCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTG 159212 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| || || || || | ||| | || || ||||| || || Sbjct 159213 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTC 159272 Query 114366 TTTACAAAAATCTGCATGGCTTAAT 114390 || || ||||| ||||| | | ||| Sbjct 159273 TTGACGAAAATTTGCATCGTTAAAT 159297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133550015592