Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq79 168 1e-36
>seq79
Length=299291
Score = 168 bits (186), Expect = 1e-36
Identities = 493/754 (65%), Gaps = 4/754 (1%)
Strand=Plus/Minus
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|||| ||| || || ||||| || || | | ||||| |||||| || ||| | |
Sbjct 119011 GCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGACAATTTCACAGCACAAG 118952
Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807
|| | ||||| || ||||||| || ||||| |||| ||| || || ||||||
Sbjct 118951 TTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCTGTTACAAGCATCCTTG 118892
Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867
|||||||||||||| || ||||| ||||| | |||| | |||||| | |
Sbjct 118891 TAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGATAGCATACCAGAGCTTC 118832
Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927
|||||||| || || | | | ||||| ||| || || || ||||| |
Sbjct 118831 TGAGCCTTGATAGTTCTTCTACCTTTGCCTTCTTTTTCATACTTTTCATAGAGGGCAACA 118772
Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCAC 244987
|| ||| || |||||||||| | || || ||| |||||||| | | ||||
Sbjct 118771 AATTCGTCTCCATAGACCTCGTCCAAACCAGGACACTCATTAGGGCACATCAAAGTCCAA 118712
Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047
|| || ||||||| |||| |||||| | |||||||||||| |||||| ||| |
Sbjct 118711 TCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAA 118652
Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107
|| |||| | || ||| || |||||| | || || | || ||||| ||
Sbjct 118651 TCTCTGGCACGGACTTCTTCCTTACCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACA 118592
Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167
||| ||||||| ||||||| ||| | |||| || || || | |||||| || || |||
Sbjct 118591 TCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTGGTCTCTTGTTACCACCTTGG 118532
Query 245168 TCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225
| || ||| ||| | || | |||||| | | || |||| || || ||||||||
Sbjct 118531 T-CAACAT-ATCTAGCAGTGTTGTTGAAAACTCTCAACATAGGGACAATACCGTTAGAAG 118474
Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTA 245285
||||| || || || |||| || || | | || ||| ||| || || |
Sbjct 118473 TACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATATTGTGGATACTCAAACCAA 118414
Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345
|| || || ||| ||||| | ||| ||| |||| | || || || ||||| |
Sbjct 118413 TACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAGTATCATAGATACCCTCAA 118354
Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405
|| ||| ||||||||| | || || || || |||| || |||||||| | | |
Sbjct 118353 TGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTTGTGGCTTGGGAGTACCAG 118294
Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439
||| ||| ||| || || || ||||||||
Sbjct 118293 CATTGTACAAAGTAGGAGAAGCATGAGTAAAGTA 118260
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337240496160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |