Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq79 168 1e-36 >seq79 Length=299291 Score = 168 bits (186), Expect = 1e-36 Identities = 493/754 (65%), Gaps = 4/754 (1%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 |||| ||| || || ||||| || || | | ||||| |||||| || ||| | | Sbjct 119011 GCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGACAATTTCACAGCACAAG 118952 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 || | ||||| || ||||||| || ||||| |||| ||| || || |||||| Sbjct 118951 TTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCTGTTACAAGCATCCTTG 118892 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 |||||||||||||| || ||||| ||||| | |||| | |||||| | | Sbjct 118891 TAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGATAGCATACCAGAGCTTC 118832 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 |||||||| || || | | | ||||| ||| || || || ||||| | Sbjct 118831 TGAGCCTTGATAGTTCTTCTACCTTTGCCTTCTTTTTCATACTTTTCATAGAGGGCAACA 118772 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCAC 244987 || ||| || |||||||||| | || || ||| |||||||| | | |||| Sbjct 118771 AATTCGTCTCCATAGACCTCGTCCAAACCAGGACACTCATTAGGGCACATCAAAGTCCAA 118712 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 || || ||||||| |||| |||||| | |||||||||||| |||||| ||| | Sbjct 118711 TCCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGATCCAAAGGGCCAAGAACAAA 118652 Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 || |||| | || ||| || |||||| | || || | || ||||| || Sbjct 118651 TCTCTGGCACGGACTTCTTCCTTACCGTGGTTCTTTCGCAAGTCGATGAATTCAAAAACA 118592 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 ||| ||||||| ||||||| ||| | |||| || || || | |||||| || || ||| Sbjct 118591 TCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTGGTCTCTTGTTACCACCTTGG 118532 Query 245168 TCCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | || ||| ||| | || | |||||| | | || |||| || || |||||||| Sbjct 118531 T-CAACAT-ATCTAGCAGTGTTGTTGAAAACTCTCAACATAGGGACAATACCGTTAGAAG 118474 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTA 245285 ||||| || || || |||| || || | | || ||| ||| || || | Sbjct 118473 TACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATATTGTGGATACTCAAACCAA 118414 Query 245286 GTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCA 245345 || || || ||| ||||| | ||| ||| |||| | || || || ||||| | Sbjct 118413 TACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAGTATCATAGATACCCTCAA 118354 Query 245346 TGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACG 245405 || ||| ||||||||| | || || || || |||| || |||||||| | | | Sbjct 118353 TGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTTGTGGCTTGGGAGTACCAG 118294 Query 245406 AGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 ||| ||| ||| || || || |||||||| Sbjct 118293 CATTGTACAAAGTAGGAGAAGCATGAGTAAAGTA 118260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337240496160