Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq79 131 2e-25
seq78 116 4e-21
seq155 113 5e-20
>seq79
Length=299291
Score = 131 bits (144), Expect = 2e-25
Identities = 596/930 (64%), Gaps = 15/930 (2%)
Strand=Plus/Minus
Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522
|||||||| | || |||| ||||| |||| || || | || |||||| |
Sbjct 119027 AGGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGAC 118968
Query 114523 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 114582
|||||| ||||| || ||| || || || |||| ||| | |||||| ||| |
Sbjct 118967 AATTTCACAGCACAAGTTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCT 118908
Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642
|||||| ||||||||||| |||||| | || | || ||||| ||||||| || || ||
Sbjct 118907 GTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGAT 118848
Query 114643 AGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 114701
||| | ||||| | || | | || | | ||| | || || || | || ||||
Sbjct 118847 AGCATACCAGAGCTTCTGAGCCTTG-ATAGTTCTTCTACCTTTGCCTTCTTTTTCATACT 118789
Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761
|| |||||||| |||| || || || | |||| | || || || || |
Sbjct 118788 TTTCATAGAGGGCAACAAATTCGTCTCCATAGACCTCGTCCAAACCAGGACACTCATTAG 118729
Query 114762 GGCAGAAGAGAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819
|||| | | || ||| | || | | ||| || | ||||||||| | ||| |||||
Sbjct 118728 GGCACATCAAAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGAT 118671
Query 114820 CCAGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 114878
||| || || |||| | ||| | | || || ||||||| | || || || ||||
Sbjct 118670 CCAAAGGGCCAAGAACAAATCTCTGGCA-CGGACTTCTTCCTTACCGTGGTTCTTTCGCA 118612
Query 114879 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCC 114937
| || | || || | | ||| ||||||| || |||| ||||| |||| | |||
Sbjct 118611 AGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTG 118552
Query 114938 TTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995
| | |||| | |||| ||||| || || ||| || || || | | ||| |
Sbjct 118551 GTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACATAG 118492
Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 115055
| | ||||| | ||| || || || || |||| || | |||| | || ||
Sbjct 118491 GGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATAT 118432
Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115
||||| || ||||||||| ||||| |||| ||||| || || | | | |
Sbjct 118431 TGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAG 118372
Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175
| | ||||| || || || |||||| |||| | | | ||| || ||||||||
Sbjct 118371 TATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTT 118312
Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGG 115234
||||| | || |||||||| ||| | | || || | || | || || ||| |||
Sbjct 118311 GTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGCAT-GAGTAAAGTACTTTTGT 118253
Query 115235 GACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 115294
||||| | || ||| || || | | | || |||||| | || || ||||| | |
Sbjct 118252 GACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAGCT 118193
Query 115295 ACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA 115354
|| | ||| | ||| | ||| ||| | || | | || | || | | | | ||||
Sbjct 118192 ACTCTCATGATCATATGTTGAGGTCTCTCAGCAATTTTTCCGTTGATCTTGAGCAAGTAA 118133
Query 115355 -CTCTTCTCCAAGGTCTTGAGACCAAAATA 115383
|||| ||||||||||||| ||| || ||
Sbjct 118132 GATCTT-TCCAAGGTCTTGAAACCGAAGTA 118104
>seq78
Length=1347436
Score = 116 bits (128), Expect = 4e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124
|| || ||||| || || | ||||| ||||| || || ||||| ||||| ||||||
Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627
Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184
|||||||| || || | ||||||||| ||||||||||| ||||| ||| |||||
Sbjct 284628 TTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAAA 284687
Query 126185 GCAAAGAGACGCTCAGCAAAGG 126206
|||| |||||||||||||||||
Sbjct 284688 GCAACGAGACGCTCAGCAAAGG 284709
>seq155
Length=566151
Score = 113 bits (124), Expect = 5e-20
Identities = 678/1071 (63%), Gaps = 47/1071 (4%)
Strand=Plus/Minus
Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647
|| |||| ||| | || ||||| || |||||||| |||| ||||||| | || | ||||
Sbjct 483782 GCTTTTGTTCGTAAATAATACATTCCTGTCTTGAGTCCCTTCTTCCAGCCGTAGAAATGC 483723
Query 113648 AT-CGAGGACAACTTGGAGAGT-GTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATT 113705
|| | || | | || | ||| || ||| ||| |||||| | ||||||||||| || |
Sbjct 483722 ATACTAGTA--AGTTTGCCAGTAGTGGGATTTTTCATGAAAATATTCATACTTTGAGACT 483665
Query 113706 GATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCC 113765
| || ||| | || || || || || |||||||| || | | ||| | | |||||
Sbjct 483664 GGTCAATGTATCGACCGCGGTCGGCGGCCATATCGATTATCACTTTCTGGCTCAATTCCC 483605
Query 113766 ACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGC 113825
| | || | || | | ||| | ||| |||| || || || |||||||| ||||
Sbjct 483604 AGGCCGTCTTATATATCTCCTTCAAATCGCCTGGAATCTCATTAATGTTTTGGATAGAGC 483545
Query 113826 CA-CCCGCCT--TGACCATGAGATCCTTCATATC--CTTTGACCAGAGACCAATCTTTTT 113880
|| | | || | | |||| | | | ||||| | || ||| | ||| | |
Sbjct 483544 CATCTTGACTAATTATCATG---TGCCTGATATCAGCATT--CCACAAACCTAATTGGGC 483490
Query 113881 GAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 113940
|||||| || |||| | |||||||| || || || | ||| ||||
Sbjct 483489 TAGATCCCTTACAAGATATTCATTGACAATTTGGAATTCGCCAGAAAGGACCCGTCGAGT 483430
Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000
||| ||||| | ||| ||| ||||| ||||| ||| ||| | ||||| | || ||
Sbjct 483429 ATATATATTTGATGTGATTGGTTCAAAACACTCGTTGAAACCAAGAATTTGCGAAGTCGA 483370
Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060
|| |||||||| ||||| | | | || | || || || |||
Sbjct 483369 AGCGGTGGGCATTGGTGCGACAACTAAAGAATTCCTAAGTCCAAACTCGGAAATATCACG 483310
Query 114061 CTTGAGGGCGTCCCAGT----------CGTAG--TTGAGCTTTGTCTCCCCCTGCCACAT 114108
||| | | ||||||| ||| | |||| | | ||| || |||||
Sbjct 483309 CTTTAAGCTCTCCCAGTCCCATAAATCCGTCGCCTTGAAATCAGGCTCACC---CCACAA 483253
Query 114109 ATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTC 114168
||| || || | || || | || || || || ||| | | | |||||||| || |
Sbjct 483252 ATCGAATTGCAACATCCCCTTCGAAGCGGGAGAACCCGAATAACTATCGTATGGTCCGTT 483193
Query 114169 AACCTCCGCCA-ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGC 114227
| | || | | | || | ||||||| || || ||||| || || ||||| ||
Sbjct 483192 TTCTTTGGCTAGCTCCATAGAT-GCCTCGACTGCCGCATGATATATAGTTTCAAATATTT 483134
Query 114228 GAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATAC 114285
| |||| | | |||| || || ||||| | | || | | |||| |
Sbjct 483133 GCACATTAAGTAATCTGGCTTCAGACGAGTCAAATGGCATACGCAGTTTCATATAAGT-- 483076
Query 114286 ATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGC 114345
||| || | |||||||| |||| | || || | ||| ||| ||||||| | | ||
Sbjct 483075 ATCTGCCAATCCTTGGACTCCGACAGCTATGGGTCTGTGTTTCACATTAGACCTCCTCGC 483016
Query 114346 GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 114405
| || |||||||| ||| | || || | | | || |||||| | | ||| || ||
Sbjct 483015 AGATTCGACGGGATAGTCATTGATGTCTATGATCTTGTTCAGATTTCTAGCGACTACTTT 482956
Query 114406 TGTGATTTCATGAAGCTTTTC---GTAAT-CAAAACTGCGA----GT-CTCTTCATTG-- 114454
| | ||||||||||||||| || || | | || | | || ||| || | |
Sbjct 482955 GGCAACTTCATGAAGCTTTTCAAAGTCATACCATACCTCAACATCGTCCTCGTCGTAGTG 482896
Query 114455 -ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513
||| || | || | || || || || |||||||| |||| ||||||||| | |
Sbjct 482895 TACAAACGTTGGTAACGCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGACGA 482836
Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573
|| | || ||||| |||||||||||||| ||||| ||||| | || || || ||
Sbjct 482835 ATATTGTACTATTTCGGTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGGTT 482776
Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 114624
|||||| ||| || ||||| || || ||||| |||| | || |||||
Sbjct 482775 TGACTTCCGGTTGCATGCATCTTTATATAGCATAAATGGATTACCAGTCTC 482725
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597352360491280
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