Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq79 131 2e-25 seq78 116 4e-21 seq155 113 5e-20 >seq79 Length=299291 Score = 131 bits (144), Expect = 2e-25 Identities = 596/930 (64%), Gaps = 15/930 (2%) Strand=Plus/Minus Query 114463 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 114522 |||||||| | || |||| ||||| |||| || || | || |||||| | Sbjct 119027 AGGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGAC 118968 Query 114523 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 114582 |||||| ||||| || ||| || || || |||| ||| | |||||| ||| | Sbjct 118967 AATTTCACAGCACAAGTTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCT 118908 Query 114583 GTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 114642 |||||| ||||||||||| |||||| | || | || ||||| ||||||| || || || Sbjct 118907 GTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGAT 118848 Query 114643 AGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 114701 ||| | ||||| | || | | || | | ||| | || || || | || |||| Sbjct 118847 AGCATACCAGAGCTTCTGAGCCTTG-ATAGTTCTTCTACCTTTGCCTTCTTTTTCATACT 118789 Query 114702 TTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTG 114761 || |||||||| |||| || || || | |||| | || || || || | Sbjct 118788 TTTCATAGAGGGCAACAAATTCGTCTCCATAGACCTCGTCCAAACCAGGACACTCATTAG 118729 Query 114762 GGCAGAAGAGAGACCATTGACCACCCT--CCTCAACACGCTTCATGAAGAGGTCTGGGAT 114819 |||| | | || ||| | || | | ||| || | ||||||||| | ||| ||||| Sbjct 118728 GGCACATCAAAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGAT 118671 Query 114820 CCAGAGAGCTGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA 114878 ||| || || |||| | ||| | | || || ||||||| | || || || |||| Sbjct 118670 CCAAAGGGCCAAGAACAAATCTCTGGCA-CGGACTTCTTCCTTACCGTGGTTCTTTCGCA 118612 Query 114879 ACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCC 114937 | || | || || | | ||| ||||||| || |||| ||||| |||| | ||| Sbjct 118611 AGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAGCACCTG 118552 Query 114938 TTACGACG--ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTG 114995 | | |||| | |||| ||||| || || ||| || || || | | ||| | Sbjct 118551 GTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACATAG 118492 Query 114996 GAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACAT 115055 | | ||||| | ||| || || || || |||| || | |||| | || || Sbjct 118491 GGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGATAT 118432 Query 115056 CATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGAC 115115 ||||| || ||||||||| ||||| |||| ||||| || || | | | | Sbjct 118431 TGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAAAG 118372 Query 115116 TGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTT 115175 | | ||||| || || || |||||| |||| | | | ||| || |||||||| Sbjct 118371 TATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACATTT 118312 Query 115176 GTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGG 115234 ||||| | || |||||||| ||| | | || || | || | || || ||| ||| Sbjct 118311 GTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGCAT-GAGTAAAGTACTTTTGT 118253 Query 115235 GACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 115294 ||||| | || ||| || || | | | || |||||| | || || ||||| | | Sbjct 118252 GACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAGCT 118193 Query 115295 ACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAA 115354 || | ||| | ||| | ||| ||| | || | | || | || | | | | |||| Sbjct 118192 ACTCTCATGATCATATGTTGAGGTCTCTCAGCAATTTTTCCGTTGATCTTGAGCAAGTAA 118133 Query 115355 -CTCTTCTCCAAGGTCTTGAGACCAAAATA 115383 |||| ||||||||||||| ||| || || Sbjct 118132 GATCTT-TCCAAGGTCTTGAAACCGAAGTA 118104 >seq78 Length=1347436 Score = 116 bits (128), Expect = 4e-21 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 || || ||||| || || | ||||| ||||| || || ||||| ||||| |||||| Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||||||| || || | ||||||||| ||||||||||| ||||| ||| ||||| Sbjct 284628 TTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAAA 284687 Query 126185 GCAAAGAGACGCTCAGCAAAGG 126206 |||| ||||||||||||||||| Sbjct 284688 GCAACGAGACGCTCAGCAAAGG 284709 >seq155 Length=566151 Score = 113 bits (124), Expect = 5e-20 Identities = 678/1071 (63%), Gaps = 47/1071 (4%) Strand=Plus/Minus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 || |||| ||| | || ||||| || |||||||| |||| ||||||| | || | |||| Sbjct 483782 GCTTTTGTTCGTAAATAATACATTCCTGTCTTGAGTCCCTTCTTCCAGCCGTAGAAATGC 483723 Query 113648 AT-CGAGGACAACTTGGAGAGT-GTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATT 113705 || | || | | || | ||| || ||| ||| |||||| | ||||||||||| || | Sbjct 483722 ATACTAGTA--AGTTTGCCAGTAGTGGGATTTTTCATGAAAATATTCATACTTTGAGACT 483665 Query 113706 GATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCC 113765 | || ||| | || || || || || |||||||| || | | ||| | | ||||| Sbjct 483664 GGTCAATGTATCGACCGCGGTCGGCGGCCATATCGATTATCACTTTCTGGCTCAATTCCC 483605 Query 113766 ACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGC 113825 | | || | || | | ||| | ||| |||| || || || |||||||| |||| Sbjct 483604 AGGCCGTCTTATATATCTCCTTCAAATCGCCTGGAATCTCATTAATGTTTTGGATAGAGC 483545 Query 113826 CA-CCCGCCT--TGACCATGAGATCCTTCATATC--CTTTGACCAGAGACCAATCTTTTT 113880 || | | || | | |||| | | | ||||| | || ||| | ||| | | Sbjct 483544 CATCTTGACTAATTATCATG---TGCCTGATATCAGCATT--CCACAAACCTAATTGGGC 483490 Query 113881 GAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAG 113940 |||||| || |||| | |||||||| || || || | ||| |||| Sbjct 483489 TAGATCCCTTACAAGATATTCATTGACAATTTGGAATTCGCCAGAAAGGACCCGTCGAGT 483430 Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 ||| ||||| | ||| ||| ||||| ||||| ||| ||| | ||||| | || || Sbjct 483429 ATATATATTTGATGTGATTGGTTCAAAACACTCGTTGAAACCAAGAATTTGCGAAGTCGA 483370 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 114060 || |||||||| ||||| | | | || | || || || ||| Sbjct 483369 AGCGGTGGGCATTGGTGCGACAACTAAAGAATTCCTAAGTCCAAACTCGGAAATATCACG 483310 Query 114061 CTTGAGGGCGTCCCAGT----------CGTAG--TTGAGCTTTGTCTCCCCCTGCCACAT 114108 ||| | | ||||||| ||| | |||| | | ||| || ||||| Sbjct 483309 CTTTAAGCTCTCCCAGTCCCATAAATCCGTCGCCTTGAAATCAGGCTCACC---CCACAA 483253 Query 114109 ATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTC 114168 ||| || || | || || | || || || || ||| | | | |||||||| || | Sbjct 483252 ATCGAATTGCAACATCCCCTTCGAAGCGGGAGAACCCGAATAACTATCGTATGGTCCGTT 483193 Query 114169 AACCTCCGCCA-ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGC 114227 | | || | | | || | ||||||| || || ||||| || || ||||| || Sbjct 483192 TTCTTTGGCTAGCTCCATAGAT-GCCTCGACTGCCGCATGATATATAGTTTCAAATATTT 483134 Query 114228 GAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATAC 114285 | |||| | | |||| || || ||||| | | || | | |||| | Sbjct 483133 GCACATTAAGTAATCTGGCTTCAGACGAGTCAAATGGCATACGCAGTTTCATATAAGT-- 483076 Query 114286 ATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGC 114345 ||| || | |||||||| |||| | || || | ||| ||| ||||||| | | || Sbjct 483075 ATCTGCCAATCCTTGGACTCCGACAGCTATGGGTCTGTGTTTCACATTAGACCTCCTCGC 483016 Query 114346 GGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTT 114405 | || |||||||| ||| | || || | | | || |||||| | | ||| || || Sbjct 483015 AGATTCGACGGGATAGTCATTGATGTCTATGATCTTGTTCAGATTTCTAGCGACTACTTT 482956 Query 114406 TGTGATTTCATGAAGCTTTTC---GTAAT-CAAAACTGCGA----GT-CTCTTCATTG-- 114454 | | ||||||||||||||| || || | | || | | || ||| || | | Sbjct 482955 GGCAACTTCATGAAGCTTTTCAAAGTCATACCATACCTCAACATCGTCCTCGTCGTAGTG 482896 Query 114455 -ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 114513 ||| || | || | || || || || |||||||| |||| ||||||||| | | Sbjct 482895 TACAAACGTTGGTAACGCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGACGA 482836 Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 || | || ||||| |||||||||||||| ||||| ||||| | || || || || Sbjct 482835 ATATTGTACTATTTCGGTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGGTT 482776 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 114624 |||||| ||| || ||||| || || ||||| |||| | || ||||| Sbjct 482775 TGACTTCCGGTTGCATGCATCTTTATATAGCATAAATGGATTACCAGTCTC 482725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352360491280