Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq32 105 7e-18 >seq32 Length=396137 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| ||||||||||| | | || || ||||||| || ||||| || Sbjct 381693 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCTTCCAGTTGCTTACCA 381752 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | ||||| ||||| |||||||| ||||| || ||||| || || ||| Sbjct 381753 GCGAAAATCAAACGCTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATCTTGGTCTTG 381812 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || ||| | || || || | ||| | |||||| || || | || Sbjct 381813 ACGTTGTCGATGGTGTCAGAAGACTCGACCTCAAGAGTGATGGTCTTACCAGTAAGGGTC 381872 Query 64427 TTTACGAAAATTTGCATT 64444 |||||||| ||||||||| Sbjct 381873 TTTACGAAGATTTGCATT 381890 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||| ||||||||||| | | || || | || || || ||||| || Sbjct 381009 GTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGGCCATCCTCGAGTTGCTTACCA 381068 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | ||||| ||||| || ||||| || || || ||||| || || ||| Sbjct 381069 GCGAAAATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGGATCTTGGTCTTA 381128 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || ||||| | ||| | |||||| || ||||| || Sbjct 381129 ACATTATCGATGGTGTCGGAAGATTCAACTTCGAGAGTGATGGTCTTACCAGTCAAGGTC 381188 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| |||||||| Sbjct 381189 TTGACGAAGATTTGCAT 381205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499643763237040