Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06- 23] 166 sequences; 16,642,635 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq79 159 3e-34 >seq79 Length=299291 Score = 159 bits (176), Expect = 3e-34 Identities = 471/726 (65%), Gaps = 0/726 (0%) Strand=Plus/Plus Query 93905 TGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG 93964 ||| ||| || || || || |||||| ||||| || |||||| || | | | |||| Sbjct 118285 TGTACAATGCTGGTACTCCCAAGCCACAAATGTCGTCTTGTTTCTTGGTAAACATGAAGG 118344 Query 93965 CCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACG 94024 |||||||| || || | || | | ||| |||||| ||||| || | | Sbjct 118345 ATGACTCCATTGAGGGTATCTATGATACTTTGAAGACCTGTGCCTTGATCTCGAAGTCTG 118404 Query 94025 CGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTA 94084 | || || || || | ||| ||||| | | ||||||| |||||||| || ||||| Sbjct 118405 CAGGTGGTATTGGTTTGAGTATCCACAATATCCGTGCCACTGGTTCCTATATTGCCGGTA 118464 Query 94085 CCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCT 94144 | || || || || ||||| | ||||||||| | | || ||||||||| | || | | Sbjct 118465 CTAACGGTACTTCTAACGGTATTGTCCCTATGTTGAGAGTTTTCAACAACACTGCTAGAT 118524 Query 94145 ACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGC 94204 | || ||||| |||||| | ||| ||| ||||||| | || | ||||| |||| Sbjct 118525 ATGTTGACCAAGGTGGTAACAAGAGACCAGGTGCTTTCGCCATGTACTTGGAGCCTTGGC 118584 Query 94205 ACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGG 94264 ||| || || | ||||||||| |||||||||||||||| || || | | | Sbjct 118585 ACGACGATGTTTTTGAATTCATCGACTTGCGAAAGAACCACGGTAAGGAAGAAGTCCGTG 118644 Query 94265 CCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAAA 94324 ||||||| | |||| || || ||| | || ||| | || ||||| | ||| || | Sbjct 118645 CCAGAGATTTGTTCTTGGCCCTTTGGATCCCCGACTTGTTCATGAAGAGAGTCAAGGCTA 118704 Query 94325 ACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGAT 94384 || | |||| | | | || || ||||| ||||| || || ||| || | |||| Sbjct 118705 ACGAGGATTGGACTTTGATGTGCCCTAATGAGTGTCCTGGTTTGGACGAGGTCTATGGAG 118764 Query 94385 CGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAGGTTATGG 94444 |||| | | | |||| || ||| | ||||| | || | ||| Sbjct 118765 ACGAATTTGTTGCCCTCTATGAAAAGTATGAAAAAGAAGGCAAAGGTAGAAGAACTATCA 118824 Query 94445 ATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCCTACA 94504 | ||| |||||| ||| || ||| | || | || ||||| |||| |||| || Sbjct 118825 AGGCTCAGAAGCTCTGGTATGCTATCCTTGAGGCCCAAACTGAGACTGGTAACCCCTTCA 118884 Query 94505 TCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGA 94564 | | | |||||| || ||| |||| || || || |||| || ||||| Sbjct 118885 TGCTCTACAAGGATGCTTGTAACAGCAAGAGTAATCAACAAAACCTGGGTACTATCAAAT 118944 Query 94565 GCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTA 94624 || || ||||| || ||||||||||| ||||||| || || | ||||| |||| Sbjct 118945 CTTCCAACTTGTGCTGTGAAATTGTCGAGTACTCTTCTCCTGAAGAAGTGGCTGTTTGTA 119004 Query 94625 ACCTGG 94630 || ||| Sbjct 119005 ACTTGG 119010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722173449360