Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq90 98.7 9e-16
seq32 98.7 9e-16
>seq90
Length=207308
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| ||||| || |||||||| | || ||| || || || || || |||
Sbjct 159093 GTAGACTCCTTTTGGATGTTGTAATCAGAAAGAGTACGACCGTCCTCAAGTTGCTTACCA 159152
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| || || ||||| || || || ||||||||||| ||| || ||||
Sbjct 159153 GCAAAGATCAAACGTTGTTGATCTGGGGGAATTCCCTCCTTGTCTTGGATCTTGGTCTTG 159212
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| |||||| | | ||| || |||| ||| | || || ||||| || ||
Sbjct 159213 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTACCGGTAAGGGTC 159272
Query 127097 TTTACAAAAATCTGCAT 127113
|| || ||||| |||||
Sbjct 159273 TTGACGAAAATTTGCAT 159289
>seq32
Length=396137
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/156 (75%), Gaps = 2/156 (1%)
Strand=Plus/Plus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || | ||| || |||||| |||| | || || || || || || ||||||||||||
Sbjct 380595 TCTTCCAACTGCTTACCAGCGAAGATAAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTG 380654
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
|| ||| || ||||| |||| |||| |||||| | | |||||| |||| ||| |
Sbjct 380655 TCTTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCAGAAGACTCGACCTCGAGGGTGAT 380713
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| |||||||||||||| || ||||| || |||||
Sbjct 380714 GGTCTTGCCGGTCAGAGTCTTGACAAAGATTTGCAT 380749
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| ||||| || ||||| ||| | || | ||| || || || || |||
Sbjct 380781 GTGGACTCCTTTTGGATGTTGTAGTCGGAAAGGGTTCTTCCATCCTCAAGTTGCTTACCA 380840
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | ||||| ||||| || || || || |||||||||||||| ||| || |||
Sbjct 380841 GCGAAAATCAAACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTA 380900
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| |||| |||||| | | |||||| || | ||| | || || || || || ||
Sbjct 380901 ACGTTG-TCGATGGTGTCGGAAGACTCGACCTCAAGGGTGATGGTCTTACCAGTGAGGGT 380959
Query 127096 TTTTACAAAAATCTGCAT 127113
|| || || || |||||
Sbjct 380960 CTTGACGAAGATTTGCAT 380977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499813335840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |