Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sugiyamaella_20xylanicola_20[genbank_20GCA_5F001939105.2_202017-06-
23] 166 sequences; 16,642,635 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq79 131 2e-25
seq155 118 1e-21
seq78 113 6e-20
>seq79
Length=299291
Score = 131 bits (144), Expect = 2e-25
Identities = 599/933 (64%), Gaps = 19/933 (2%)
Strand=Plus/Minus
Query 116424 AGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTAT 116483
|||||||| | || |||| ||||| |||| || || | || |||||| |
Sbjct 119027 AGGAAGGGACAAAGAAGCCAAGTTACAAACAGCCACTTCTTCAGGAGAAGAGTACTCGAC 118968
Query 116484 AATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGT 116543
|||||| ||||| || ||| || || || |||| ||| | |||||| ||| |
Sbjct 118967 AATTTCACAGCACAAGTTGGAAGATTTGATAGTACCCAGGTTTTGTTGATTACTCTTGCT 118908
Query 116544 GTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAAT 116603
|||||| ||||||||||||||||| | || | || ||||| ||||||| || || ||
Sbjct 118907 GTTACAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTTTGGGCCTCAAGGAT 118848
Query 116604 AGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACT 116662
||| | ||| | | || | | || | | ||| | || || || | || ||||
Sbjct 118847 AGCATACCAGAGCTTCTGAGCCTTG-ATAGTTCTTCTACCTTTGCCTTCTTTTTCATACT 118789
Query 116663 TTGTGTAGAGGGCCTCAAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCT 116721
|| |||||||| |||| || || ||| || |||| | || || || ||
Sbjct 118788 TTTCATAGAGGGCAACAAATTCGTC-TCCATAGACCTCGTCCAAACCAGGACACTCATTA 118730
Query 116722 GGACAGAAGAGAGACCATTGACCACCCT--CCTCAACCCGCTTCATGAAGAGGTCTGGGA 116779
|| || | | || ||| | || | | ||| || | ||||||||| | ||| ||||
Sbjct 118729 GGGCACATCAAAGTCCAAT--CCTCGTTAGCCTTGACTCTCTTCATGAACAAGTCGGGGA 118672
Query 116780 TCCAGAGCGCCGAGAAGAGATC-CCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 116838
|||| || ||| |||| | ||| | | || || ||||||| | || || || |||
Sbjct 118671 TCCAAAGGGCCAAGAACAAATCTCTGGCA-CGGACTTCTTCCTTACCGTGGTTCTTTCGC 118613
Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898
|| || | || || | | ||| ||||||| || |||| ||||| |||| | | ||
Sbjct 118612 AAGTCGATGAATTCAAAAACATCGTCGTGCCAAGGCTCCAAGTACATGGCGAAAG-CACC 118554
Query 116899 TTGCGAC----GACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCAT 116954
| | | |||| | |||| ||||| || || || ||| || || | | |||
Sbjct 118553 TGGTCTCTTGTTACCACCTTGGTCAACATATCTAGCAGTGTTGTTGAAAACTCTCAACAT 118494
Query 116955 TGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGAC 117014
|| | ||||| | ||| || || || || |||| || |||| | ||
Sbjct 118493 AGGGACAATACCGTTAGAAGTACCGTTAGTACCGGCAATATAGGAACCAGTGGCACGGAT 118434
Query 117015 ATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAG 117074
|| |||||| || ||||||||| ||||| |||| ||||| || || | | |
Sbjct 118433 ATTGTGGATACTCAAACCAATACCACCTGCAGACTTCGAGATCAAGGCACAGGTCTTCAA 118374
Query 117075 ACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACAT 117134
| | | ||||| || || || |||||| |||| | | | ||| || ||||||
Sbjct 118373 AGTATCATAGATACCCTCAATGGAGTCATCCTTCATGTTTACCAAGAAACAAGACGACAT 118314
Query 117135 TTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTT 117193
||||||| | || |||||||| ||| | | || || | || | || || ||| ||
Sbjct 118313 TTGTGGCTTGGGAGTACCAGCATTGTACAAAGTAGGAGAAGCAT-GAGTAAAGTACTTTT 118255
Query 117194 GGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTG 117253
| ||||| | || ||| || || | | | || |||||| | || || ||||| | |
Sbjct 118254 GTGACATGTAATTGTAAGTTTCAATGGCCTTGGCAATGTCCGCGCCATGGATACCAACAG 118195
Query 117254 AGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGT 117313
|| | ||| | ||| | ||| ||| | || | | || | || | | | | ||
Sbjct 118194 CTACTCTCATGATCATATGTTGAGGTCTCTCAGCAATTTTTCCGTTGATCTTGAGCAAGT 118135
Query 117314 AA-CTCTTCTCCAAGGTCTTGAGACCAAAATAG 117345
|| |||| ||||||||||||| ||| || |||
Sbjct 118134 AAGATCTT-TCCAAGGTCTTGAAACCGAAGTAG 118103
>seq155
Length=566151
Score = 118 bits (130), Expect = 1e-21
Identities = 678/1070 (63%), Gaps = 45/1070 (4%)
Strand=Plus/Minus
Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608
|| |||| ||| | || ||||| || |||||||| |||| ||||||| | || | ||||
Sbjct 483782 GCTTTTGTTCGTAAATAATACATTCCTGTCTTGAGTCCCTTCTTCCAGCCGTAGAAATGC 483723
Query 115609 ATTGAGGACAACTTGGAGAGT-GTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 115667
|| | || || | ||| || ||| ||| |||||| | ||||||||||| || ||
Sbjct 483722 ATACTAGT-AAGTTTGCCAGTAGTGGGATTTTTCATGAAAATATTCATACTTTGAGACTG 483664
Query 115668 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 115727
|| ||| | || || || || || |||||||| || | | ||| | | ||||||
Sbjct 483663 GTCAATGTATCGACCGCGGTCGGCGGCCATATCGATTATCACTTTCTGGCTCAATTCCCA 483604
Query 115728 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCC 115787
| || | || | | ||| | ||| |||| || || || ||||||||||||||
Sbjct 483603 GGCCGTCTTATATATCTCCTTCAAATCGCCTGGAATCTCATTAATGTTTTGGATAGAGCC 483544
Query 115788 A-CCTGCCT--TGACCATGAGATCCTTCATATC--CTTTGACCAGAGACCAATCTTCTTG 115842
| | || || | | |||| | | | ||||| | || ||| | ||| | |
Sbjct 483543 ATCTTGACTAATTATCATG---TGCCTGATATCAGCATT--CCACAAACCTAATTGGGCT 483489
Query 115843 AGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 115902
|||||| || || | | |||||||| || || || | ||| |||| |
Sbjct 483488 AGATCCCTTACAAGATATTCATTGACAATTTGGAATTCGCCAGAAAGGACCCGTCGAGTA 483429
Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962
|| || || | ||| ||| ||||| ||||| ||| ||| | ||||| | || ||
Sbjct 483428 TATATATTTGATGTGATTGGTTCAAAACACTCGTTGAAACCAAGAATTTGCGAAGTCGAA 483369
Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022
|| |||||||| ||||| | | | || | || || | | | ||| |
Sbjct 483368 GCGGTGGGCATTGGTGCGACAACTAAAGAATTCCTAAGTCCAAACTCGGAAATATCACGC 483309
Query 116023 TTGAGGGCGTCCCAGT----------CGTAG--TTGAGCTTTGTCTCCCCCTCCCACATA 116070
|| | | ||||||| ||| | |||| | | ||| | |||||| |
Sbjct 483308 TTTAAGCTCTCCCAGTCCCATAAATCCGTCGCCTTGAAATCAGGCTCAC---CCCACAAA 483252
Query 116071 TCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCA 116130
|| || || | || || | || || || || ||| | | | || ||||| || |
Sbjct 483251 TCGAATTGCAACATCCCCTTCGAAGCGGGAGAACCCGAATAACTATCGTATGGTCCGTTT 483192
Query 116131 ACCTCCGCCA-ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCG 116189
| | || | | | || | ||||||| || || ||||| || || ||||| || |
Sbjct 483191 TCTTTGGCTAGCTCCATAGAT-GCCTCGACTGCCGCATGATATATAGTTTCAAATATTTG 483133
Query 116190 AGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--GCACAAAATAAATACA 116247
|||| | | |||| || || ||||| | | ||| | | |||| | |
Sbjct 483132 CACATTAAGTAATCTGGCTTCAGACGAGTCAAATGGCATACGCAGTTTCATATAAGT--A 483075
Query 116248 TCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCG 116307
|| || | |||||||| |||| | || || | ||| ||| ||||||| | | ||
Sbjct 483074 TCTGCCAATCCTTGGACTCCGACAGCTATGGGTCTGTGTTTCACATTAGACCTCCTCGCA 483015
Query 116308 GTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTT 116367
| || |||||||| ||| | || || | | | || |||||| | | ||| || ||
Sbjct 483014 GATTCGACGGGATAGTCATTGATGTCTATGATCTTGTTCAGATTTCTAGCGACTACTTTG 482955
Query 116368 GTGATTTCATGAAGCTTTTC---GTAAT-CAAAACTGCGA----GT-CTCTTCATTG--- 116415
| | ||||||||||||||| || || | | || | | || ||| || | |
Sbjct 482954 GCAACTTCATGAAGCTTTTCAAAGTCATACCATACCTCAACATCGTCCTCGTCGTAGTGT 482895
Query 116416 ACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTG 116475
||| || | || | || || || || |||||||| |||| ||||||||| | |
Sbjct 482894 ACAAACGTTGGTAACGCTATAGAGGCGAGATTACAAACAGCGGTCTCATCAGGAGACGAA 482835
Query 116476 TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTT 116535
|| | || ||||| |||||||||||||| ||||| ||||| | || || || |||
Sbjct 482834 TATTGTACTATTTCGGTACACAAATTTGACGATTTAATTGTGCCAAGATTATTCTGGTTT 482775
Query 116536 GACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
||||| ||| || ||||| || || |||||| |||| | || |||||
Sbjct 482774 GACTTCCGGTTGCATGCATCTTTATATAGCATAAATGGATTACCAGTCTC 482725
>seq78
Length=1347436
Score = 113 bits (124), Expect = 6e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597
|| || ||||| || || | ||||| ||||| || ||| ||||| ||||| ||||||
Sbjct 284568 CCTTCATCACGAGAAATCAACTCATTAGAGAAAGTCAAACCAGGCATAAGACCACGCTTC 284627
Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657
|||||||| || || | |||||| |||||||||||||| ||||| ||| |||||
Sbjct 284628 TTCAACCAAAAGATACTAGCAAATGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAAA 284687
Query 127658 GCAAATAGACGCTCGGCAAAGG 127679
|||| |||||||| |||||||
Sbjct 284688 GCAACGAGACGCTCAGCAAAGG 284709
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505926972560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |